Protein–RNA interactions for Protein: P48443

RXRG, Retinoic acid receptor RXR-gamma, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRGP48443 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RXRGP48443 CASP1-216ENST00000534497 825 ntTSL 5 BASIC6.08□□□□□ -1.44
RXRGP48443 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.08□□□□□ -1.44
RXRGP48443 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC6.08□□□□□ -1.44
RXRGP48443 AC007494.1-201ENST00000562293 760 ntBASIC6.08□□□□□ -1.44
RXRGP48443 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC6.08□□□□□ -1.44
RXRGP48443 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.08□□□□□ -1.44
RXRGP48443 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.08□□□□□ -1.44
RXRGP48443 AP005119.1-201ENST00000580956 292 ntBASIC6.08□□□□□ -1.44
RXRGP48443 AC005244.1-201ENST00000582566 339 ntBASIC6.08□□□□□ -1.44
RXRGP48443 AC007448.1-201ENST00000582714 234 ntBASIC6.08□□□□□ -1.44
RXRGP48443 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.08□□□□□ -1.44
RXRGP48443 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC6.08□□□□□ -1.44
RXRGP48443 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.08□□□□□ -1.44
RXRGP48443 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.08□□□□□ -1.44
RXRGP48443 MIR6768-201ENST00000610734 72 ntBASIC6.08□□□□□ -1.44
RXRGP48443 MIR6793-201ENST00000612376 63 ntBASIC6.08□□□□□ -1.44
RXRGP48443 U1.25-201ENST00000614085 162 ntBASIC6.08□□□□□ -1.44
RXRGP48443 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.08□□□□□ -1.44
RXRGP48443 U1.31-201ENST00000620022 160 ntBASIC6.08□□□□□ -1.44
RXRGP48443 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.08□□□□□ -1.44
RXRGP48443 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC6.08□□□□□ -1.44
RXRGP48443 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC6.08□□□□□ -1.44
RXRGP48443 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC6.08□□□□□ -1.44
RXRGP48443 AC079298.2-201ENST00000623885 459 ntBASIC6.08□□□□□ -1.44
RXRGP48443 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RXRGP48443 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.08□□□□□ -1.44
RXRGP48443 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RXRGP48443 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RXRGP48443 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RXRGP48443 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RXRGP48443 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
RXRGP48443 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.07□□□□□ -1.44
RXRGP48443 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
RXRGP48443 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
RXRGP48443 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RXRGP48443 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
RXRGP48443 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
RXRGP48443 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC6.07□□□□□ -1.44
RXRGP48443 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6.07□□□□□ -1.44
RXRGP48443 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.07□□□□□ -1.44
RXRGP48443 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.07□□□□□ -1.44
RXRGP48443 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC6.07□□□□□ -1.44
RXRGP48443 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
RXRGP48443 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
RXRGP48443 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
RXRGP48443 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RXRGP48443 RNU6-249P-201ENST00000363016 102 ntBASIC6.07□□□□□ -1.44
RXRGP48443 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC6.07□□□□□ -1.44
RXRGP48443 AL132875.1-201ENST00000403623 949 ntBASIC6.07□□□□□ -1.44
RXRGP48443 AL034374.1-201ENST00000406329 351 ntBASIC6.07□□□□□ -1.44
RXRGP48443 RNA5SP178-201ENST00000410380 128 ntBASIC6.07□□□□□ -1.44
RXRGP48443 RN7SKP229-201ENST00000410465 302 ntBASIC6.07□□□□□ -1.44
RXRGP48443 BX284632.2-201ENST00000421091 399 ntBASIC6.07□□□□□ -1.44
RXRGP48443 AL035660.1-201ENST00000422041 222 ntBASIC6.07□□□□□ -1.44
RXRGP48443 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC6.07□□□□□ -1.44
RXRGP48443 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RXRGP48443 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.07□□□□□ -1.44
RXRGP48443 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.07□□□□□ -1.44
RXRGP48443 AL390879.1-201ENST00000439143 386 ntBASIC6.07□□□□□ -1.44
RXRGP48443 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC6.07□□□□□ -1.44
RXRGP48443 snoU13.29-201ENST00000459370 104 ntBASIC6.07□□□□□ -1.44
RXRGP48443 RN7SL193P-201ENST00000491708 276 ntBASIC6.07□□□□□ -1.44
RXRGP48443 HMGB1P3-201ENST00000502802 616 ntBASIC6.07□□□□□ -1.44
RXRGP48443 AC098799.1-201ENST00000504752 800 ntBASIC6.07□□□□□ -1.44
RXRGP48443 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.07□□□□□ -1.44
RXRGP48443 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.07□□□□□ -1.44
RXRGP48443 AC021269.1-201ENST00000526860 705 ntBASIC6.07□□□□□ -1.44
RXRGP48443 AP000648.1-201ENST00000529682 397 ntBASIC6.07□□□□□ -1.44
RXRGP48443 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.07□□□□□ -1.44
RXRGP48443 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.07□□□□□ -1.44
RXRGP48443 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.07□□□□□ -1.44
RXRGP48443 AC009120.3-201ENST00000563335 499 ntBASIC6.07□□□□□ -1.44
RXRGP48443 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.07□□□□□ -1.44
RXRGP48443 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.07□□□□□ -1.44
RXRGP48443 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
RXRGP48443 AL031601.1-201ENST00000605702 394 ntBASIC6.07□□□□□ -1.44
RXRGP48443 AC034236.3-201ENST00000605999 461 ntBASIC6.07□□□□□ -1.44
RXRGP48443 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC6.07□□□□□ -1.44
RXRGP48443 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
RXRGP48443 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
RXRGP48443 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RXRGP48443 AC022325.1-201ENST00000502748 2199 ntBASIC6.07□□□□□ -1.44
RXRGP48443 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RXRGP48443 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.07□□□□□ -1.44
RXRGP48443 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RXRGP48443 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
RXRGP48443 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
RXRGP48443 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
RXRGP48443 AC109446.4-201ENST00000623235 2755 ntBASIC6.06□□□□□ -1.44
RXRGP48443 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.06□□□□□ -1.44
RXRGP48443 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.06□□□□□ -1.44
RXRGP48443 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.06□□□□□ -1.44
RXRGP48443 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RXRGP48443 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC6.06□□□□□ -1.44
RXRGP48443 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RXRGP48443 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RXRGP48443 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.06□□□□□ -1.44
RXRGP48443 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC6.06□□□□□ -1.44
RXRGP48443 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms