Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AP005432.2-201ENST00000608162 586 ntBASIC6.42□□□□□ -1.38
COL4A5P29400 AL356752.1-201ENST00000615844 593 ntBASIC6.42□□□□□ -1.38
COL4A5P29400 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC6.42□□□□□ -1.38
COL4A5P29400 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC6.42□□□□□ -1.38
COL4A5P29400 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
COL4A5P29400 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC6.42□□□□□ -1.38
COL4A5P29400 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COL4A5P29400 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL4A5P29400 WBP11P1-201ENST00000562560 1931 ntBASIC6.42□□□□□ -1.38
COL4A5P29400 AC006600.2-201ENST00000624834 2506 ntBASIC6.42□□□□□ -1.38
COL4A5P29400 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.42□□□□□ -1.38
COL4A5P29400 NXF4-202ENST00000416098 1465 ntBASIC6.42□□□□□ -1.38
COL4A5P29400 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL4A5P29400 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC6.42□□□□□ -1.38
COL4A5P29400 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC6.42□□□□□ -1.38
COL4A5P29400 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL4A5P29400 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.42□□□□□ -1.38
COL4A5P29400 CHEK2P3-201ENST00000416118 248 ntBASIC6.42□□□□□ -1.38
COL4A5P29400 RPS4XP16-201ENST00000427198 791 ntBASIC6.42□□□□□ -1.38
COL4A5P29400 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC6.42□□□□□ -1.38
COL4A5P29400 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC6.42□□□□□ -1.38
COL4A5P29400 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC6.42□□□□□ -1.38
COL4A5P29400 NDUFA5P8-201ENST00000449019 346 ntBASIC6.42□□□□□ -1.38
COL4A5P29400 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC6.42□□□□□ -1.38
COL4A5P29400 NDUFA12P1-201ENST00000455914 406 ntBASIC6.42□□□□□ -1.38
COL4A5P29400 ATP5LP5-201ENST00000483050 299 ntBASIC6.42□□□□□ -1.38
COL4A5P29400 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.42□□□□□ -1.38
COL4A5P29400 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COL4A5P29400 UBE2FP2-201ENST00000566646 462 ntBASIC6.42□□□□□ -1.38
COL4A5P29400 EIF3FP1-201ENST00000613970 806 ntBASIC6.42□□□□□ -1.38
COL4A5P29400 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC6.42□□□□□ -1.38
COL4A5P29400 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL4A5P29400 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.42□□□□□ -1.38
COL4A5P29400 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL4A5P29400 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL4A5P29400 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COL4A5P29400 NLRP3P1-201ENST00000622303 1785 ntBASIC6.41□□□□□ -1.38
COL4A5P29400 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL4A5P29400 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL4A5P29400 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.41□□□□□ -1.38
COL4A5P29400 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL4A5P29400 AC079741.1-201ENST00000321498 212 ntBASIC6.41□□□□□ -1.38
COL4A5P29400 RNA5SP428-201ENST00000365129 132 ntBASIC6.41□□□□□ -1.38
COL4A5P29400 NPM1P40-201ENST00000412758 733 ntBASIC6.41□□□□□ -1.38
COL4A5P29400 P2RY10P2-201ENST00000416730 913 ntBASIC6.41□□□□□ -1.38
COL4A5P29400 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC6.41□□□□□ -1.38
COL4A5P29400 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC6.41□□□□□ -1.38
COL4A5P29400 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC6.41□□□□□ -1.38
COL4A5P29400 NDUFA5P9-201ENST00000472609 340 ntBASIC6.41□□□□□ -1.38
COL4A5P29400 RPL23AP72-201ENST00000492447 435 ntBASIC6.41□□□□□ -1.38
COL4A5P29400 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC6.41□□□□□ -1.38
COL4A5P29400 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.41□□□□□ -1.38
COL4A5P29400 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC6.41□□□□□ -1.38
COL4A5P29400 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC6.41□□□□□ -1.38
COL4A5P29400 MIR5096-201ENST00000583713 70 ntBASIC6.41□□□□□ -1.38
COL4A5P29400 AC008655.2-201ENST00000597049 304 ntTSL 4 BASIC6.41□□□□□ -1.38
COL4A5P29400 AC009704.2-201ENST00000618739 483 ntBASIC6.41□□□□□ -1.38
COL4A5P29400 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COL4A5P29400 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC6.41□□□□□ -1.38
COL4A5P29400 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC6.41□□□□□ -1.38
COL4A5P29400 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
COL4A5P29400 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
COL4A5P29400 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
COL4A5P29400 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.41□□□□□ -1.38
COL4A5P29400 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL4A5P29400 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL4A5P29400 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
COL4A5P29400 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL4A5P29400 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
COL4A5P29400 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL4A5P29400 GMDS-AS1-202ENST00000505870 8217 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COL4A5P29400 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.41□□□□□ -1.38
COL4A5P29400 AC144833.1-201ENST00000567953 4089 ntBASIC6.41□□□□□ -1.38
COL4A5P29400 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COL4A5P29400 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
COL4A5P29400 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC6.41□□□□□ -1.38
COL4A5P29400 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL4A5P29400 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COL4A5P29400 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
COL4A5P29400 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL4A5P29400 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
COL4A5P29400 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
COL4A5P29400 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC6.4□□□□□ -1.38
COL4A5P29400 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.4□□□□□ -1.38
COL4A5P29400 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.4□□□□□ -1.38
COL4A5P29400 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
COL4A5P29400 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
COL4A5P29400 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
COL4A5P29400 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.4□□□□□ -1.38
COL4A5P29400 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
COL4A5P29400 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
COL4A5P29400 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC6.4□□□□□ -1.38
COL4A5P29400 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
COL4A5P29400 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
COL4A5P29400 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC6.4□□□□□ -1.38
COL4A5P29400 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC6.4□□□□□ -1.38
COL4A5P29400 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.4□□□□□ -1.38
COL4A5P29400 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC6.4□□□□□ -1.38
COL4A5P29400 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC6.4□□□□□ -1.38
COL4A5P29400 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms