Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
RIMBP3Q9UFD9 MFSD8-239ENST00000641590 2479 ntBASIC8.54□□□□□ -1.04
RIMBP3Q9UFD9 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
RIMBP3Q9UFD9 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
RIMBP3Q9UFD9 FREM1-202ENST00000380880 7324 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
RIMBP3Q9UFD9 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
RIMBP3Q9UFD9 RPL23AP1-201ENST00000428990 471 ntBASIC8.54□□□□□ -1.04
RIMBP3Q9UFD9 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC8.54□□□□□ -1.04
RIMBP3Q9UFD9 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC8.54□□□□□ -1.04
RIMBP3Q9UFD9 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC8.54□□□□□ -1.04
RIMBP3Q9UFD9 IGKV1OR22-5-201ENST00000458718 354 ntBASIC8.54□□□□□ -1.04
RIMBP3Q9UFD9 HMGN2P25-201ENST00000486956 268 ntBASIC8.54□□□□□ -1.04
RIMBP3Q9UFD9 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
RIMBP3Q9UFD9 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
RIMBP3Q9UFD9 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC8.54□□□□□ -1.04
RIMBP3Q9UFD9 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC8.54□□□□□ -1.04
RIMBP3Q9UFD9 AL356218.2-201ENST00000605264 187 ntBASIC8.54□□□□□ -1.04
RIMBP3Q9UFD9 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC8.54□□□□□ -1.04
RIMBP3Q9UFD9 AC092747.4-201ENST00000620519 1861 ntBASIC8.54□□□□□ -1.04
RIMBP3Q9UFD9 AL078621.3-201ENST00000623707 2042 ntBASIC8.54□□□□□ -1.04
RIMBP3Q9UFD9 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
RIMBP3Q9UFD9 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
RIMBP3Q9UFD9 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
RIMBP3Q9UFD9 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC8.54□□□□□ -1.04
RIMBP3Q9UFD9 AC013488.1-201ENST00000526618 1838 ntBASIC8.53□□□□□ -1.04
RIMBP3Q9UFD9 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC8.53□□□□□ -1.04
RIMBP3Q9UFD9 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
RIMBP3Q9UFD9 ATF7-202ENST00000456903 5218 ntAPPRIS P2 TSL 5 BASIC8.53□□□□□ -1.04
RIMBP3Q9UFD9 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
RIMBP3Q9UFD9 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
RIMBP3Q9UFD9 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC8.53□□□□□ -1.04
RIMBP3Q9UFD9 PLXDC2-203ENST00000377252 12468 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
RIMBP3Q9UFD9 CYP1D1P-201ENST00000416662 1433 ntBASIC8.53□□□□□ -1.04
RIMBP3Q9UFD9 U3.3-201ENST00000362986 216 ntBASIC8.53□□□□□ -1.04
RIMBP3Q9UFD9 AC008280.1-201ENST00000418851 412 ntBASIC8.53□□□□□ -1.04
RIMBP3Q9UFD9 AC010618.1-201ENST00000469924 477 ntBASIC8.53□□□□□ -1.04
RIMBP3Q9UFD9 RGS5-219ENST00000528019 512 ntTSL 4 BASIC8.53□□□□□ -1.04
RIMBP3Q9UFD9 OR4A40P-201ENST00000533878 948 ntBASIC8.53□□□□□ -1.04
RIMBP3Q9UFD9 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC8.53□□□□□ -1.04
RIMBP3Q9UFD9 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC8.53□□□□□ -1.04
RIMBP3Q9UFD9 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC8.53□□□□□ -1.04
RIMBP3Q9UFD9 MIR8089-201ENST00000620165 82 ntBASIC8.53□□□□□ -1.04
RIMBP3Q9UFD9 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC8.53□□□□□ -1.04
RIMBP3Q9UFD9 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
RIMBP3Q9UFD9 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC8.53□□□□□ -1.04
RIMBP3Q9UFD9 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
RIMBP3Q9UFD9 AC092724.1-201ENST00000624623 3397 ntBASIC8.52□□□□□ -1.04
RIMBP3Q9UFD9 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC8.52□□□□□ -1.04
RIMBP3Q9UFD9 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
RIMBP3Q9UFD9 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
RIMBP3Q9UFD9 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC8.52□□□□□ -1.05
RIMBP3Q9UFD9 AC010928.1-201ENST00000592477 1447 ntBASIC8.52□□□□□ -1.05
RIMBP3Q9UFD9 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
RIMBP3Q9UFD9 DRP2-205ENST00000541709 6835 ntAPPRIS ALT1 TSL 2 BASIC8.52□□□□□ -1.05
RIMBP3Q9UFD9 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
RIMBP3Q9UFD9 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC8.52□□□□□ -1.05
RIMBP3Q9UFD9 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC8.52□□□□□ -1.05
RIMBP3Q9UFD9 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
RIMBP3Q9UFD9 AGGF1P7-201ENST00000562369 913 ntBASIC8.52□□□□□ -1.05
RIMBP3Q9UFD9 MIR132-201ENST00000591554 101 ntBASIC8.52□□□□□ -1.05
RIMBP3Q9UFD9 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC8.52□□□□□ -1.05
RIMBP3Q9UFD9 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
RIMBP3Q9UFD9 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
RIMBP3Q9UFD9 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
RIMBP3Q9UFD9 MYPN-205ENST00000613327 6116 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
RIMBP3Q9UFD9 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
RIMBP3Q9UFD9 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
RIMBP3Q9UFD9 AL731556.1-201ENST00000394628 3711 ntBASIC8.52□□□□□ -1.05
RIMBP3Q9UFD9 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC8.52□□□□□ -1.05
RIMBP3Q9UFD9 MT-RNR2-201ENST00000387347 1559 ntBASIC8.52□□□□□ -1.05
RIMBP3Q9UFD9 ALB-214ENST00000509063 1911 ntTSL 5 BASIC8.52□□□□□ -1.05
RIMBP3Q9UFD9 SLC7A2-204ENST00000494857 7622 ntAPPRIS ALT1 TSL 5 BASIC8.52□□□□□ -1.05
RIMBP3Q9UFD9 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
RIMBP3Q9UFD9 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC8.52□□□□□ -1.05
RIMBP3Q9UFD9 RAB21-201ENST00000261263 15546 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
RIMBP3Q9UFD9 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
RIMBP3Q9UFD9 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC8.51□□□□□ -1.05
RIMBP3Q9UFD9 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
RIMBP3Q9UFD9 AL732292.1-201ENST00000426692 226 ntBASIC8.51□□□□□ -1.05
RIMBP3Q9UFD9 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
RIMBP3Q9UFD9 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC8.51□□□□□ -1.05
RIMBP3Q9UFD9 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
RIMBP3Q9UFD9 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC8.51□□□□□ -1.05
RIMBP3Q9UFD9 IGHVIII-13-1-201ENST00000517613 291 ntBASIC8.51□□□□□ -1.05
RIMBP3Q9UFD9 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC8.51□□□□□ -1.05
RIMBP3Q9UFD9 BNIP3P19-201ENST00000605397 577 ntBASIC8.51□□□□□ -1.05
RIMBP3Q9UFD9 AC005858.4-201ENST00000623191 700 ntBASIC8.51□□□□□ -1.05
RIMBP3Q9UFD9 AC021106.3-201ENST00000623925 531 ntBASIC8.51□□□□□ -1.05
RIMBP3Q9UFD9 AC100757.1-201ENST00000616872 1835 ntBASIC8.51□□□□□ -1.05
RIMBP3Q9UFD9 MROH3P-201ENST00000435735 2676 ntBASIC8.51□□□□□ -1.05
RIMBP3Q9UFD9 AC104447.1-201ENST00000624214 2124 ntBASIC8.51□□□□□ -1.05
RIMBP3Q9UFD9 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
RIMBP3Q9UFD9 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
RIMBP3Q9UFD9 HLF-210ENST00000575345 3589 ntTSL 2 BASIC8.51□□□□□ -1.05
RIMBP3Q9UFD9 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC8.51□□□□□ -1.05
RIMBP3Q9UFD9 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC8.51□□□□□ -1.05
RIMBP3Q9UFD9 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC8.51□□□□□ -1.05
RIMBP3Q9UFD9 NSF-206ENST00000575068 2667 ntTSL 2 BASIC8.51□□□□□ -1.05
RIMBP3Q9UFD9 ZNF827-203ENST00000508784 7463 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
RIMBP3Q9UFD9 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms