Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
CHD8Q9HCK8 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CHD8Q9HCK8 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CHD8Q9HCK8 AP004607.3-201ENST00000530354 3915 ntBASIC5.2□□□□□ -1.58
CHD8Q9HCK8 LCOR-201ENST00000286067 4542 ntBASIC5.2□□□□□ -1.58
CHD8Q9HCK8 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CHD8Q9HCK8 DYNC1I2P1-201ENST00000435916 1838 ntBASIC5.2□□□□□ -1.58
CHD8Q9HCK8 MIR133B-201ENST00000362210 119 ntBASIC5.2□□□□□ -1.58
CHD8Q9HCK8 RN7SKP100-201ENST00000411258 284 ntBASIC5.2□□□□□ -1.58
CHD8Q9HCK8 AC119751.6-201ENST00000416712 186 ntBASIC5.2□□□□□ -1.58
CHD8Q9HCK8 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.2□□□□□ -1.58
CHD8Q9HCK8 EIF2S2P2-201ENST00000447161 982 ntBASIC5.2□□□□□ -1.58
CHD8Q9HCK8 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC5.2□□□□□ -1.58
CHD8Q9HCK8 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.2□□□□□ -1.58
CHD8Q9HCK8 AC134349.2-201ENST00000535136 910 ntBASIC5.2□□□□□ -1.58
CHD8Q9HCK8 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.2□□□□□ -1.58
CHD8Q9HCK8 AL161756.2-201ENST00000604597 246 ntBASIC5.2□□□□□ -1.58
CHD8Q9HCK8 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CHD8Q9HCK8 AL353763.2-201ENST00000623489 1903 ntBASIC5.2□□□□□ -1.58
CHD8Q9HCK8 CTNND1-219ENST00000528621 5907 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CHD8Q9HCK8 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CHD8Q9HCK8 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CHD8Q9HCK8 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
CHD8Q9HCK8 CYP1D1P-201ENST00000416662 1433 ntBASIC5.2□□□□□ -1.58
CHD8Q9HCK8 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CHD8Q9HCK8 NLGN4X-204ENST00000381095 5870 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CHD8Q9HCK8 XRCC6P5-201ENST00000435236 1795 ntBASIC5.2□□□□□ -1.58
CHD8Q9HCK8 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CHD8Q9HCK8 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.19□□□□□ -1.58
CHD8Q9HCK8 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.19□□□□□ -1.58
CHD8Q9HCK8 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.19□□□□□ -1.58
CHD8Q9HCK8 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.19□□□□□ -1.58
CHD8Q9HCK8 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.19□□□□□ -1.58
CHD8Q9HCK8 AC060766.1-201ENST00000590824 627 ntBASIC5.19□□□□□ -1.58
CHD8Q9HCK8 AC003992.1-201ENST00000635364 557 ntBASIC5.19□□□□□ -1.58
CHD8Q9HCK8 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CHD8Q9HCK8 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
CHD8Q9HCK8 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CHD8Q9HCK8 ZBTB21-203ENST00000398499 5806 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CHD8Q9HCK8 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CHD8Q9HCK8 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
CHD8Q9HCK8 RPEL1-201ENST00000441178 2130 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CHD8Q9HCK8 CASC19-205ENST00000641013 1411 ntBASIC5.19□□□□□ -1.58
CHD8Q9HCK8 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CHD8Q9HCK8 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
CHD8Q9HCK8 ZNF471-202ENST00000591537 5859 ntTSL 2 BASIC5.19□□□□□ -1.58
CHD8Q9HCK8 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CHD8Q9HCK8 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.19□□□□□ -1.58
CHD8Q9HCK8 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC5.19□□□□□ -1.58
CHD8Q9HCK8 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CHD8Q9HCK8 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.19□□□□□ -1.58
CHD8Q9HCK8 HNRNPA1P54-201ENST00000411857 9714 ntBASIC5.19□□□□□ -1.58
CHD8Q9HCK8 TNPO1P2-201ENST00000426249 2665 ntBASIC5.19□□□□□ -1.58
CHD8Q9HCK8 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.19□□□□□ -1.58
CHD8Q9HCK8 MIR199B-201ENST00000384849 110 ntBASIC5.19□□□□□ -1.58
CHD8Q9HCK8 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.19□□□□□ -1.58
CHD8Q9HCK8 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.19□□□□□ -1.58
CHD8Q9HCK8 DSTNP5-201ENST00000427921 523 ntBASIC5.19□□□□□ -1.58
CHD8Q9HCK8 RBMY2TP-201ENST00000451162 947 ntBASIC5.19□□□□□ -1.58
CHD8Q9HCK8 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CHD8Q9HCK8 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.19□□□□□ -1.58
CHD8Q9HCK8 RN7SKP92-201ENST00000517266 244 ntBASIC5.19□□□□□ -1.58
CHD8Q9HCK8 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.19□□□□□ -1.58
CHD8Q9HCK8 AC025574.2-201ENST00000615621 514 ntBASIC5.19□□□□□ -1.58
CHD8Q9HCK8 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CHD8Q9HCK8 AC105235.1-201ENST00000623208 1816 ntBASIC5.19□□□□□ -1.58
CHD8Q9HCK8 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CHD8Q9HCK8 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
CHD8Q9HCK8 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CHD8Q9HCK8 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CHD8Q9HCK8 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CHD8Q9HCK8 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
CHD8Q9HCK8 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CHD8Q9HCK8 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CHD8Q9HCK8 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CHD8Q9HCK8 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CHD8Q9HCK8 RN7SKP280-201ENST00000364196 304 ntBASIC5.18□□□□□ -1.58
CHD8Q9HCK8 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CHD8Q9HCK8 RN7SKP177-201ENST00000410567 355 ntBASIC5.18□□□□□ -1.58
CHD8Q9HCK8 HSPD1P12-201ENST00000429127 1069 ntBASIC5.18□□□□□ -1.58
CHD8Q9HCK8 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CHD8Q9HCK8 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.18□□□□□ -1.58
CHD8Q9HCK8 AC025674.1-201ENST00000507074 324 ntBASIC5.18□□□□□ -1.58
CHD8Q9HCK8 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC5.18□□□□□ -1.58
CHD8Q9HCK8 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC5.18□□□□□ -1.58
CHD8Q9HCK8 VN1R85P-201ENST00000601587 426 ntBASIC5.18□□□□□ -1.58
CHD8Q9HCK8 AL139041.1-201ENST00000605480 610 ntBASIC5.18□□□□□ -1.58
CHD8Q9HCK8 AC015660.5-201ENST00000623238 564 ntBASIC5.18□□□□□ -1.58
CHD8Q9HCK8 IPO5-229ENST00000631030 192 ntTSL 5 BASIC5.18□□□□□ -1.58
CHD8Q9HCK8 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.18□□□□□ -1.58
CHD8Q9HCK8 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
CHD8Q9HCK8 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CHD8Q9HCK8 AC011933.2-201ENST00000578539 2790 ntBASIC5.18□□□□□ -1.58
CHD8Q9HCK8 HOOK3-201ENST00000307602 14398 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CHD8Q9HCK8 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CHD8Q9HCK8 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CHD8Q9HCK8 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CHD8Q9HCK8 GAPDHP25-201ENST00000447061 1001 ntBASIC5.18□□□□□ -1.58
CHD8Q9HCK8 IGKV3OR22-2-201ENST00000517943 313 ntBASIC5.18□□□□□ -1.58
CHD8Q9HCK8 AC009643.1-201ENST00000532030 391 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms