Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.64□□□□□ -1.67
HDHD3Q9BSH5 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
HDHD3Q9BSH5 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
HDHD3Q9BSH5 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
HDHD3Q9BSH5 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
HDHD3Q9BSH5 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
HDHD3Q9BSH5 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HDHD3Q9BSH5 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HDHD3Q9BSH5 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
HDHD3Q9BSH5 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC4.64□□□□□ -1.67
HDHD3Q9BSH5 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HDHD3Q9BSH5 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HDHD3Q9BSH5 CAP1P2-201ENST00000417455 1409 ntBASIC4.63□□□□□ -1.67
HDHD3Q9BSH5 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.63□□□□□ -1.67
HDHD3Q9BSH5 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC4.63□□□□□ -1.67
HDHD3Q9BSH5 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
HDHD3Q9BSH5 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
HDHD3Q9BSH5 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
HDHD3Q9BSH5 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.63□□□□□ -1.67
HDHD3Q9BSH5 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HDHD3Q9BSH5 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
HDHD3Q9BSH5 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
HDHD3Q9BSH5 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.63□□□□□ -1.67
HDHD3Q9BSH5 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC4.63□□□□□ -1.67
HDHD3Q9BSH5 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HDHD3Q9BSH5 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HDHD3Q9BSH5 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.63□□□□□ -1.67
HDHD3Q9BSH5 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HDHD3Q9BSH5 RNA5SP241-201ENST00000391326 114 ntBASIC4.63□□□□□ -1.67
HDHD3Q9BSH5 MIR1203-201ENST00000408812 85 ntBASIC4.63□□□□□ -1.67
HDHD3Q9BSH5 RMRPP5-201ENST00000411156 267 ntBASIC4.63□□□□□ -1.67
HDHD3Q9BSH5 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC4.63□□□□□ -1.67
HDHD3Q9BSH5 AC007161.1-204ENST00000423039 460 ntBASIC4.63□□□□□ -1.67
HDHD3Q9BSH5 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HDHD3Q9BSH5 NAP1L4P3-201ENST00000432820 1147 ntBASIC4.63□□□□□ -1.67
HDHD3Q9BSH5 AC007679.3-201ENST00000434035 414 ntBASIC4.63□□□□□ -1.67
HDHD3Q9BSH5 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC4.63□□□□□ -1.67
HDHD3Q9BSH5 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC4.63□□□□□ -1.67
HDHD3Q9BSH5 TIMM8BP2-201ENST00000445940 251 ntBASIC4.63□□□□□ -1.67
HDHD3Q9BSH5 CBX1P2-201ENST00000453841 458 ntBASIC4.63□□□□□ -1.67
HDHD3Q9BSH5 HMGN1P9-201ENST00000515212 298 ntBASIC4.63□□□□□ -1.67
HDHD3Q9BSH5 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC4.63□□□□□ -1.67
HDHD3Q9BSH5 AC027369.2-201ENST00000528030 440 ntBASIC4.63□□□□□ -1.67
HDHD3Q9BSH5 OR8G3P-201ENST00000533406 921 ntBASIC4.63□□□□□ -1.67
HDHD3Q9BSH5 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC4.63□□□□□ -1.67
HDHD3Q9BSH5 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC4.63□□□□□ -1.67
HDHD3Q9BSH5 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC4.63□□□□□ -1.67
HDHD3Q9BSH5 DPPA2P4-201ENST00000563717 878 ntBASIC4.63□□□□□ -1.67
HDHD3Q9BSH5 AC090286.3-201ENST00000573133 187 ntBASIC4.63□□□□□ -1.67
HDHD3Q9BSH5 AP005403.1-201ENST00000579720 229 ntBASIC4.63□□□□□ -1.67
HDHD3Q9BSH5 H3F3BP2-201ENST00000583907 357 ntBASIC4.63□□□□□ -1.67
HDHD3Q9BSH5 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC4.63□□□□□ -1.67
HDHD3Q9BSH5 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HDHD3Q9BSH5 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HDHD3Q9BSH5 AL354950.1-201ENST00000614150 568 ntBASIC4.63□□□□□ -1.67
HDHD3Q9BSH5 AC025574.2-201ENST00000615621 514 ntBASIC4.63□□□□□ -1.67
HDHD3Q9BSH5 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HDHD3Q9BSH5 AL683826.1-201ENST00000624104 627 ntBASIC4.63□□□□□ -1.67
HDHD3Q9BSH5 FRG1EP-201ENST00000634469 770 ntBASIC4.63□□□□□ -1.67
HDHD3Q9BSH5 CASC19-274ENST00000642018 970 ntBASIC4.63□□□□□ -1.67
HDHD3Q9BSH5 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HDHD3Q9BSH5 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HDHD3Q9BSH5 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
HDHD3Q9BSH5 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.63□□□□□ -1.67
HDHD3Q9BSH5 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
HDHD3Q9BSH5 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.63□□□□□ -1.67
HDHD3Q9BSH5 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
HDHD3Q9BSH5 AL450345.1-202ENST00000605741 3881 ntBASIC4.63□□□□□ -1.67
HDHD3Q9BSH5 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HDHD3Q9BSH5 AL353796.1-201ENST00000561542 3241 ntBASIC4.63□□□□□ -1.67
HDHD3Q9BSH5 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.63□□□□□ -1.67
HDHD3Q9BSH5 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HDHD3Q9BSH5 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.62□□□□□ -1.67
HDHD3Q9BSH5 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HDHD3Q9BSH5 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
HDHD3Q9BSH5 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
HDHD3Q9BSH5 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
HDHD3Q9BSH5 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HDHD3Q9BSH5 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
HDHD3Q9BSH5 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
HDHD3Q9BSH5 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HDHD3Q9BSH5 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HDHD3Q9BSH5 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
HDHD3Q9BSH5 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HDHD3Q9BSH5 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HDHD3Q9BSH5 NPM1P38-201ENST00000403835 865 ntBASIC4.62□□□□□ -1.67
HDHD3Q9BSH5 SETP9-201ENST00000423837 832 ntBASIC4.62□□□□□ -1.67
HDHD3Q9BSH5 AC127526.2-201ENST00000426436 775 ntBASIC4.62□□□□□ -1.67
HDHD3Q9BSH5 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC4.62□□□□□ -1.67
HDHD3Q9BSH5 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC4.62□□□□□ -1.67
HDHD3Q9BSH5 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC4.62□□□□□ -1.67
HDHD3Q9BSH5 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.62□□□□□ -1.67
HDHD3Q9BSH5 NENFP3-201ENST00000503735 313 ntBASIC4.62□□□□□ -1.67
HDHD3Q9BSH5 SCARNA20.4-201ENST00000516969 131 ntBASIC4.62□□□□□ -1.67
HDHD3Q9BSH5 MRPS16P1-201ENST00000523462 412 ntBASIC4.62□□□□□ -1.67
HDHD3Q9BSH5 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC4.62□□□□□ -1.67
HDHD3Q9BSH5 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC4.62□□□□□ -1.67
HDHD3Q9BSH5 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC4.62□□□□□ -1.67
HDHD3Q9BSH5 GTF2IP11-201ENST00000526931 420 ntBASIC4.62□□□□□ -1.67
HDHD3Q9BSH5 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms