Protein–RNA interactions for Protein: P0DMS9

TMIGD3, Transmembrane domain-containing protein TMIGD3, humanhuman

Predicted RBP Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMIGD3P0DMS9 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TMIGD3P0DMS9 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
TMIGD3P0DMS9 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.69□□□□□ -1.5
TMIGD3P0DMS9 AL353743.3-201ENST00000442109 1468 ntBASIC5.69□□□□□ -1.5
TMIGD3P0DMS9 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TMIGD3P0DMS9 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
TMIGD3P0DMS9 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
TMIGD3P0DMS9 AC062022.1-201ENST00000451026 1684 ntBASIC5.69□□□□□ -1.5
TMIGD3P0DMS9 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TMIGD3P0DMS9 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.69□□□□□ -1.5
TMIGD3P0DMS9 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.69□□□□□ -1.5
TMIGD3P0DMS9 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
TMIGD3P0DMS9 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TMIGD3P0DMS9 AC011815.2-201ENST00000618230 2021 ntBASIC5.69□□□□□ -1.5
TMIGD3P0DMS9 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TMIGD3P0DMS9 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 RLIMP2-201ENST00000427891 1563 ntBASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 AL359976.1-201ENST00000418655 3528 ntBASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 AL359715.3-201ENST00000569267 2123 ntBASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 AC097063.1-201ENST00000426714 1797 ntBASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 RN7SKP28-201ENST00000364770 305 ntBASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 AC007618.1-201ENST00000366455 732 ntBASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 RNU6-354P-201ENST00000383862 107 ntBASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 RNU6-610P-201ENST00000384264 107 ntBASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 AC092642.1-201ENST00000392417 425 ntBASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 RPL22P22-201ENST00000395439 379 ntBASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 AL391422.1-201ENST00000402155 436 ntBASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 AL451046.1-201ENST00000406097 534 ntBASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 RMRPP5-201ENST00000411156 267 ntBASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 TATDN1P1-201ENST00000414123 891 ntBASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 AL035422.1-201ENST00000414193 397 ntBASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 RPL23AP18-201ENST00000416139 468 ntBASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 AC115283.1-201ENST00000427353 400 ntBASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 KCTD9P1-201ENST00000430462 1167 ntBASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 AL389925.1-201ENST00000432257 728 ntBASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 RPL6P30-201ENST00000443382 862 ntBASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 AC069277.2-201ENST00000454211 432 ntBASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 RN7SL643P-201ENST00000471845 291 ntBASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 CYCSP20-201ENST00000473154 315 ntBASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 PSMA2P2-201ENST00000504319 686 ntBASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 SNX18P24-201ENST00000505249 671 ntBASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 AC034205.1-201ENST00000520621 638 ntBASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 AC084337.1-201ENST00000524809 686 ntBASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 MTATP6P24-201ENST00000576835 677 ntBASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 BMS1P7-201ENST00000602440 1052 ntBASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 AC073137.1-201ENST00000605636 634 ntBASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 AC140725.3-201ENST00000616193 880 ntBASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 AL356863.1-201ENST00000623378 1080 ntBASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 OR7E91P-202ENST00000642062 1198 ntBASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
TMIGD3P0DMS9 AC010624.4-201ENST00000597606 1351 ntBASIC5.67□□□□□ -1.5
TMIGD3P0DMS9 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TMIGD3P0DMS9 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
TMIGD3P0DMS9 ZNF90P1-201ENST00000480493 1951 ntBASIC5.67□□□□□ -1.5
TMIGD3P0DMS9 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TMIGD3P0DMS9 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
TMIGD3P0DMS9 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.67□□□□□ -1.5
TMIGD3P0DMS9 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
TMIGD3P0DMS9 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
TMIGD3P0DMS9 AL359715.4-201ENST00000606629 1436 ntBASIC5.67□□□□□ -1.5
TMIGD3P0DMS9 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
TMIGD3P0DMS9 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
TMIGD3P0DMS9 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.67□□□□□ -1.5
TMIGD3P0DMS9 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TMIGD3P0DMS9 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
TMIGD3P0DMS9 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TMIGD3P0DMS9 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TMIGD3P0DMS9 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 377.6 ms