Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 AC002090.1-201ENST00000625000 2138 ntBASIC9.98□□□□□ -0.81
TRIM35Q9UPQ4 MTND5P6-201ENST00000422338 1798 ntBASIC9.98□□□□□ -0.81
TRIM35Q9UPQ4 FRMPD2-213ENST00000636244 4194 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
TRIM35Q9UPQ4 C18orf32-203ENST00000613385 5395 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
TRIM35Q9UPQ4 TPD52-213ENST00000520527 2638 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
TRIM35Q9UPQ4 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC9.98□□□□□ -0.81
TRIM35Q9UPQ4 AC138393.1-206ENST00000540997 1886 ntBASIC9.98□□□□□ -0.81
TRIM35Q9UPQ4 SP140-203ENST00000392045 3246 ntAPPRIS P3 TSL 2 BASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 FNDC3A-204ENST00000492622 6286 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 MTCO1P12-201ENST00000414273 1543 ntBASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 LINC00208-201ENST00000304233 2150 ntTSL 2 BASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 MIR365B-201ENST00000362317 111 ntBASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 RNU5E-8P-201ENST00000363502 116 ntBASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 SSX6-201ENST00000376932 562 ntBASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 Y_RNA.395-201ENST00000383945 109 ntBASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 AL451061.1-201ENST00000407887 862 ntBASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 PGAM1P3-201ENST00000420790 565 ntBASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 SNX18P3-201ENST00000424993 835 ntBASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 AL954705.1-201ENST00000435277 559 ntBASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 MRPS21P1-201ENST00000453850 223 ntBASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 RN7SL91P-201ENST00000469313 291 ntBASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 HMGB1P30-201ENST00000492455 606 ntBASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 AC012170.1-201ENST00000495139 359 ntBASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 SUMO2P17-201ENST00000504438 285 ntBASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 KLHL2P1-201ENST00000508691 521 ntBASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 ROPN1B-207ENST00000511082 782 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 AC021146.1-201ENST00000511202 716 ntBASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 AC114797.1-201ENST00000514003 728 ntBASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 SCARNA20.1-201ENST00000516009 138 ntBASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 LY96-202ENST00000518893 430 ntTSL 3 BASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 AC109635.6-201ENST00000525487 1113 ntBASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 FXYD5-207ENST00000541435 898 ntAPPRIS P2 TSL 2 BASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 PRR13-204ENST00000547368 688 ntAPPRIS ALT2 TSL 3 BASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 AL137100.2-201ENST00000555786 315 ntBASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 FRG2IP-201ENST00000563581 781 ntBASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 AC103808.6-201ENST00000578035 464 ntTSL 3 BASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 OR5AH1P-201ENST00000595968 283 ntBASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 AL390058.1-201ENST00000603834 629 ntBASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 AP000238.1-201ENST00000608759 426 ntBASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 MIAT_exon1.1-201ENST00000617016 135 ntBASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 AC078909.2-201ENST00000620584 398 ntBASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 PRPS1L1-202ENST00000638645 957 ntAPPRIS P2 BASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 RABGEF1-203ENST00000439720 3065 ntTSL 2 BASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 PTPRT-206ENST00000373198 12746 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 DIO2-202ENST00000438257 6136 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 AL356019.2-201ENST00000556738 3829 ntBASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 AC107884.1-207ENST00000504206 4433 ntTSL 3 BASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 ZNF611-204ENST00000543227 4517 ntAPPRIS P1 TSL 4 BASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 RSPH4A-201ENST00000229554 2825 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 CASC23-201ENST00000534076 1563 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 PIWIL2-204ENST00000521356 3488 ntTSL 2 BASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 CAP1-206ENST00000372805 2217 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 C15orf41-202ENST00000437989 2240 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
TRIM35Q9UPQ4 HIP1-201ENST00000336926 8013 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
TRIM35Q9UPQ4 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.81
TRIM35Q9UPQ4 KCNK2-203ENST00000444842 3379 ntAPPRIS ALT1 TSL 1 (best) BASIC9.96□□□□□ -0.81
TRIM35Q9UPQ4 MGAT5-201ENST00000281923 8144 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
TRIM35Q9UPQ4 USP32P2-201ENST00000412260 4329 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
TRIM35Q9UPQ4 MARCH6-204ENST00000503788 2874 ntTSL 2 BASIC9.96□□□□□ -0.81
TRIM35Q9UPQ4 ABHD3-205ENST00000578270 2080 ntTSL 5 BASIC9.96□□□□□ -0.81
TRIM35Q9UPQ4 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
TRIM35Q9UPQ4 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
TRIM35Q9UPQ4 OR5J1P-201ENST00000313544 939 ntBASIC9.96□□□□□ -0.82
TRIM35Q9UPQ4 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC9.96□□□□□ -0.82
TRIM35Q9UPQ4 Y_RNA.47-201ENST00000362697 108 ntBASIC9.96□□□□□ -0.82
TRIM35Q9UPQ4 KCNAB1-202ENST00000389634 1119 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
TRIM35Q9UPQ4 RN7SKP39-201ENST00000410773 322 ntBASIC9.96□□□□□ -0.82
TRIM35Q9UPQ4 RPS3AP3-201ENST00000411933 242 ntBASIC9.96□□□□□ -0.82
TRIM35Q9UPQ4 AC096644.3-201ENST00000416788 338 ntBASIC9.96□□□□□ -0.82
TRIM35Q9UPQ4 AL109924.2-201ENST00000419800 934 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
TRIM35Q9UPQ4 BEND7P1-201ENST00000422058 457 ntBASIC9.96□□□□□ -0.82
TRIM35Q9UPQ4 EIF4A1P2-201ENST00000422633 1220 ntBASIC9.96□□□□□ -0.82
TRIM35Q9UPQ4 FDPSP1-201ENST00000424976 1071 ntBASIC9.96□□□□□ -0.82
TRIM35Q9UPQ4 AC009965.2-201ENST00000425328 970 ntBASIC9.96□□□□□ -0.82
TRIM35Q9UPQ4 PHBP4-201ENST00000437447 837 ntBASIC9.96□□□□□ -0.82
TRIM35Q9UPQ4 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC9.96□□□□□ -0.82
TRIM35Q9UPQ4 RPEL1-201ENST00000441178 2130 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
TRIM35Q9UPQ4 LINC00954-202ENST00000449086 2995 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
TRIM35Q9UPQ4 JADE1-203ENST00000452328 5544 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.82
TRIM35Q9UPQ4 TCEAL4P1-201ENST00000453620 588 ntBASIC9.96□□□□□ -0.82
TRIM35Q9UPQ4 CHIAP1-201ENST00000456220 995 ntBASIC9.96□□□□□ -0.82
TRIM35Q9UPQ4 HMGN2P26-201ENST00000463169 339 ntBASIC9.96□□□□□ -0.82
TRIM35Q9UPQ4 RN7SL815P-201ENST00000470970 290 ntBASIC9.96□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms