Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 PRDM10-205ENST00000526082 3308 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 ABLIM3-207ENST00000508983 2011 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 NUDT4-206ENST00000549992 3607 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 POT1-201ENST00000357628 4080 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 WDR19-201ENST00000399820 4520 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 ADAMTS3-201ENST00000286657 6409 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 PHLPP2-206ENST00000568954 8317 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 ZNF577-201ENST00000301399 3074 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 CNR2-201ENST00000374472 5254 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 ATXN7L1-202ENST00000419735 5417 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 LRRC37A6P-202ENST00000448648 5444 ntBASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 AC069222.1-201ENST00000608028 3360 ntBASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 USPL1-201ENST00000255304 3814 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 PTPN14-205ENST00000543945 3842 ntTSL 5 BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 AC108751.5-201ENST00000492880 1336 ntBASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 TMX2-201ENST00000278422 1631 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 EPHA1-AS1-202ENST00000429289 5018 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 AL929601.3-201ENST00000613990 2086 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 NUSAP1-210ENST00000560177 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 DRP2-205ENST00000541709 6835 ntAPPRIS ALT1 TSL 2 BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 MAPK10-233ENST00000515650 2394 ntTSL 5 BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 LINC01568-201ENST00000554640 2544 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 VIT-202ENST00000379242 2810 ntAPPRIS P3 TSL 2 BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 LPAR1-202ENST00000374430 2993 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 KLF5-205ENST00000539231 2951 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 GRIA2-201ENST00000264426 3445 ntAPPRIS ALT1 TSL 1 (best) BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 ZKSCAN5-201ENST00000326775 4178 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 HBS1L-205ENST00000367837 7163 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 KCNA2-205ENST00000633222 11877 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 TSC22D1-212ENST00000611198 2877 ntTSL 2 BASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 TSC22D1-213ENST00000622051 2872 ntTSL 2 BASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 TCF4-203ENST00000398339 2551 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 FKTN-202ENST00000357998 2404 ntTSL 5 BASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 FOLH1B-202ENST00000529567 2145 ntBASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 EML5-201ENST00000380664 5910 ntTSL 5 BASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 PCDH15-224ENST00000612394 5765 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 CCDC63-204ENST00000552694 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 MTFR2-205ENST00000451457 1524 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 DNM1L-207ENST00000452533 4439 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 SEC23IP-201ENST00000369075 7168 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 HSPA8P17-201ENST00000427029 1382 ntBASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 TRIM51FP-201ENST00000526452 1353 ntBASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 TANC2-201ENST00000389520 6404 ntTSL 5 BASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 NPIPB11-201ENST00000524087 3653 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 B3GALT5-202ENST00000380618 2763 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 LINC00662-201ENST00000561521 2480 ntTSL 2 BASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 HRNR-201ENST00000368801 9623 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 RXFP1-207ENST00000470033 2175 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 PPP2R5C-218ENST00000556260 2013 ntTSL 3 BASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 KIAA0753-207ENST00000572370 3263 ntAPPRIS ALT2 TSL 2 BASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 ABCB4-203ENST00000359206 3923 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 GDNF-208ENST00000620847 3638 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 TTC39B-206ENST00000507285 2243 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 AC093849.1-201ENST00000563631 2209 ntBASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 OR4D6-201ENST00000300127 1054 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 MBD3L1-201ENST00000305625 748 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 OR10J3-201ENST00000332217 990 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 RNU6-238P-201ENST00000363313 106 ntBASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 Y_RNA.148-201ENST00000363557 117 ntBASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 Y_RNA.158-201ENST00000363651 101 ntBASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 Y_RNA.231-201ENST00000364358 102 ntBASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 RNU6-99P-201ENST00000364721 107 ntBASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 U8.7-201ENST00000364940 136 ntBASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 RNA5SP442-201ENST00000365050 107 ntBASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 RN7SKP1-201ENST00000365525 307 ntBASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 FANK1-201ENST00000368689 522 ntTSL 3 BASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 TTI1-201ENST00000373447 3825 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 AL139327.1-201ENST00000382988 348 ntBASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 Y_RNA.387-201ENST00000383918 102 ntBASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 RNU6-378P-201ENST00000384324 107 ntBASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 H2AFZP3-201ENST00000394213 387 ntBASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 RPL7-203ENST00000396466 762 ntTSL 3 BASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 AC092952.1-201ENST00000397646 1209 ntBASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 PTMAP8-201ENST00000397729 342 ntBASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 AL355615.1-201ENST00000406187 641 ntBASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 RNU4-27P-201ENST00000410889 139 ntBASIC2.63□□□□□ -1.99
KRTAP4-3Q9BYR4 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 159.8 ms