Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC7.16□□□□□ -1.26
ABCA3Q99758 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
ABCA3Q99758 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
ABCA3Q99758 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
ABCA3Q99758 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
ABCA3Q99758 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC7.16□□□□□ -1.26
ABCA3Q99758 RNA5SP428-201ENST00000365129 132 ntBASIC7.16□□□□□ -1.26
ABCA3Q99758 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
ABCA3Q99758 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC7.16□□□□□ -1.26
ABCA3Q99758 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC7.16□□□□□ -1.26
ABCA3Q99758 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC7.16□□□□□ -1.26
ABCA3Q99758 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC7.16□□□□□ -1.26
ABCA3Q99758 RPL7P11-201ENST00000437586 658 ntBASIC7.16□□□□□ -1.26
ABCA3Q99758 CYCSP42-201ENST00000450823 238 ntBASIC7.16□□□□□ -1.26
ABCA3Q99758 AP000797.2-201ENST00000475768 606 ntBASIC7.16□□□□□ -1.26
ABCA3Q99758 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC7.16□□□□□ -1.26
ABCA3Q99758 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC7.16□□□□□ -1.26
ABCA3Q99758 AC022034.1-201ENST00000512867 2156 ntBASIC7.16□□□□□ -1.26
ABCA3Q99758 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC7.16□□□□□ -1.26
ABCA3Q99758 YWHABP2-201ENST00000540201 713 ntBASIC7.16□□□□□ -1.26
ABCA3Q99758 MIR4301-201ENST00000577203 66 ntBASIC7.16□□□□□ -1.26
ABCA3Q99758 GMFG-202ENST00000594700 397 ntTSL 2 BASIC7.16□□□□□ -1.26
ABCA3Q99758 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC7.16□□□□□ -1.26
ABCA3Q99758 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC7.16□□□□□ -1.26
ABCA3Q99758 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
ABCA3Q99758 AL353729.2-201ENST00000605859 1249 ntBASIC7.16□□□□□ -1.26
ABCA3Q99758 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC7.16□□□□□ -1.26
ABCA3Q99758 AP001885.1-201ENST00000621658 558 ntBASIC7.16□□□□□ -1.26
ABCA3Q99758 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
ABCA3Q99758 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC7.16□□□□□ -1.26
ABCA3Q99758 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
ABCA3Q99758 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
ABCA3Q99758 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC7.16□□□□□ -1.26
ABCA3Q99758 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC7.16□□□□□ -1.26
ABCA3Q99758 PABPC1P8-201ENST00000452851 2086 ntBASIC7.16□□□□□ -1.26
ABCA3Q99758 CC2D2A-204ENST00000503292 5175 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
ABCA3Q99758 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC7.16□□□□□ -1.26
ABCA3Q99758 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC7.16□□□□□ -1.26
ABCA3Q99758 AL031651.1-201ENST00000615357 1438 ntBASIC7.16□□□□□ -1.26
ABCA3Q99758 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
ABCA3Q99758 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC7.16□□□□□ -1.26
ABCA3Q99758 AC079741.1-201ENST00000321498 212 ntBASIC7.15□□□□□ -1.26
ABCA3Q99758 RPL5P25-201ENST00000441148 775 ntBASIC7.15□□□□□ -1.26
ABCA3Q99758 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC7.15□□□□□ -1.26
ABCA3Q99758 AC073072.2-201ENST00000447425 348 ntBASIC7.15□□□□□ -1.26
ABCA3Q99758 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC7.15□□□□□ -1.26
ABCA3Q99758 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC7.15□□□□□ -1.26
ABCA3Q99758 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC7.15□□□□□ -1.26
ABCA3Q99758 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC7.15□□□□□ -1.26
ABCA3Q99758 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC7.15□□□□□ -1.26
ABCA3Q99758 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC7.15□□□□□ -1.26
ABCA3Q99758 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
ABCA3Q99758 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
ABCA3Q99758 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC7.15□□□□□ -1.26
ABCA3Q99758 POLQ-201ENST00000264233 8775 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
ABCA3Q99758 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC7.15□□□□□ -1.26
ABCA3Q99758 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
ABCA3Q99758 AC079777.1-201ENST00000623836 1953 ntBASIC7.15□□□□□ -1.26
ABCA3Q99758 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
ABCA3Q99758 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC7.15□□□□□ -1.26
ABCA3Q99758 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC7.15□□□□□ -1.26
ABCA3Q99758 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
ABCA3Q99758 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC7.15□□□□□ -1.26
ABCA3Q99758 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
ABCA3Q99758 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC7.15□□□□□ -1.27
ABCA3Q99758 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
ABCA3Q99758 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
ABCA3Q99758 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC7.15□□□□□ -1.27
ABCA3Q99758 RN7SKP100-201ENST00000411258 284 ntBASIC7.15□□□□□ -1.27
ABCA3Q99758 OR2AM1P-201ENST00000422137 422 ntBASIC7.15□□□□□ -1.27
ABCA3Q99758 AL590399.4-201ENST00000436561 601 ntBASIC7.15□□□□□ -1.27
ABCA3Q99758 KNOP1P3-201ENST00000446933 426 ntBASIC7.15□□□□□ -1.27
ABCA3Q99758 AC092754.1-201ENST00000472975 479 ntBASIC7.15□□□□□ -1.27
ABCA3Q99758 ATP5LP5-201ENST00000483050 299 ntBASIC7.15□□□□□ -1.27
ABCA3Q99758 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
ABCA3Q99758 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
ABCA3Q99758 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC7.15□□□□□ -1.27
ABCA3Q99758 AL162431.4-201ENST00000604674 411 ntBASIC7.15□□□□□ -1.27
ABCA3Q99758 AL161616.1-201ENST00000611867 286 ntBASIC7.15□□□□□ -1.27
ABCA3Q99758 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC7.15□□□□□ -1.27
ABCA3Q99758 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC7.15□□□□□ -1.27
ABCA3Q99758 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
ABCA3Q99758 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
ABCA3Q99758 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
ABCA3Q99758 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
ABCA3Q99758 SECISBP2L-201ENST00000261847 6779 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
ABCA3Q99758 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
ABCA3Q99758 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC7.14□□□□□ -1.27
ABCA3Q99758 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
ABCA3Q99758 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
ABCA3Q99758 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC7.14□□□□□ -1.27
ABCA3Q99758 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
ABCA3Q99758 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
ABCA3Q99758 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
ABCA3Q99758 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC7.14□□□□□ -1.27
ABCA3Q99758 COX6CP17-201ENST00000421389 185 ntBASIC7.14□□□□□ -1.27
ABCA3Q99758 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC7.14□□□□□ -1.27
ABCA3Q99758 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC7.14□□□□□ -1.27
ABCA3Q99758 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC7.14□□□□□ -1.27
ABCA3Q99758 RBMY2TP-201ENST00000451162 947 ntBASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms