Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
ALMS1Q8TCU4 AL121886.1-201ENST00000358609 435 ntBASIC3.7□□□□□ -1.82
ALMS1Q8TCU4 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
ALMS1Q8TCU4 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
ALMS1Q8TCU4 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC3.7□□□□□ -1.82
ALMS1Q8TCU4 RN7SKP122-201ENST00000515923 296 ntBASIC3.7□□□□□ -1.82
ALMS1Q8TCU4 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC3.7□□□□□ -1.82
ALMS1Q8TCU4 SSX9-202ENST00000608568 580 ntTSL 4 BASIC3.7□□□□□ -1.82
ALMS1Q8TCU4 C20orf194-201ENST00000252032 6869 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 AL078621.3-201ENST00000623707 2042 ntBASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 ABCA9-202ENST00000453985 6116 ntTSL 5 BASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 RN7SKP6-201ENST00000364795 319 ntBASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 HPRT1P1-201ENST00000509498 657 ntBASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 AC034205.1-201ENST00000520621 638 ntBASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 AC092490.3-201ENST00000545370 572 ntBASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 MIR5095-201ENST00000578844 88 ntBASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 ZNF402P-201ENST00000404435 3100 ntBASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 RNA5SP326-201ENST00000363209 110 ntBASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 RPL7P58-201ENST00000402913 758 ntBASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 AL513533.1-201ENST00000453728 415 ntBASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 RN7SL41P-201ENST00000476144 297 ntBASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 AC005377.1-201ENST00000605126 456 ntBASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 AC091046.3-201ENST00000631455 1574 ntBASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 RASGEF1B-203ENST00000436139 6323 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 FAM32BP-201ENST00000344033 333 ntBASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 AC016712.1-201ENST00000431088 378 ntBASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 AC097484.1-201ENST00000471148 389 ntBASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 RN7SL481P-201ENST00000477764 299 ntBASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 IGBP1P5-201ENST00000507524 1000 ntBASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 AC021678.3-201ENST00000517893 476 ntBASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 AC060766.1-201ENST00000590824 627 ntBASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 POT1-202ENST00000393329 3950 ntTSL 5 BASIC3.69□□□□□ -1.82
ALMS1Q8TCU4 SCN9A-203ENST00000409672 9768 ntAPPRIS P2 TSL 5 BASIC3.68□□□□□ -1.82
ALMS1Q8TCU4 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
ALMS1Q8TCU4 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
ALMS1Q8TCU4 AL034546.1-201ENST00000623740 3693 ntBASIC3.68□□□□□ -1.82
ALMS1Q8TCU4 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
ALMS1Q8TCU4 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC3.68□□□□□ -1.82
ALMS1Q8TCU4 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
ALMS1Q8TCU4 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
ALMS1Q8TCU4 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
ALMS1Q8TCU4 RPS4XP9-201ENST00000405151 780 ntBASIC3.68□□□□□ -1.82
ALMS1Q8TCU4 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC3.68□□□□□ -1.82
ALMS1Q8TCU4 AC234781.3-201ENST00000452540 973 ntBASIC3.68□□□□□ -1.82
ALMS1Q8TCU4 RPL17P2-201ENST00000491913 451 ntBASIC3.68□□□□□ -1.82
ALMS1Q8TCU4 HMGB1P40-201ENST00000525121 540 ntBASIC3.68□□□□□ -1.82
ALMS1Q8TCU4 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.68□□□□□ -1.82
ALMS1Q8TCU4 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.68□□□□□ -1.82
ALMS1Q8TCU4 MTCO1P1-201ENST00000624263 1081 ntBASIC3.68□□□□□ -1.82
ALMS1Q8TCU4 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
ALMS1Q8TCU4 AC005224.3-201ENST00000584683 2140 ntBASIC3.68□□□□□ -1.82
ALMS1Q8TCU4 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
ALMS1Q8TCU4 AC006511.3-201ENST00000624929 1783 ntBASIC3.68□□□□□ -1.82
ALMS1Q8TCU4 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC3.68□□□□□ -1.82
ALMS1Q8TCU4 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
ALMS1Q8TCU4 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms