Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 TRIM55-202ENST00000315962 2914 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 GTF2IP1-202ENST00000614592 2047 ntBASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 LINC02035-201ENST00000610128 5476 ntBASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 GABRA6-201ENST00000274545 2128 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 BX322650.1-201ENST00000332359 2143 ntBASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 CCL13-201ENST00000225844 851 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 TRBV6-6-201ENST00000390371 388 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 NHP2P2-201ENST00000396362 460 ntBASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 AL121977.1-201ENST00000401636 979 ntBASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 RN7SKP85-201ENST00000411349 318 ntBASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 AC093642.1-201ENST00000412193 565 ntTSL 3 BASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 RPL17P12-201ENST00000413391 526 ntBASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 BTF3P9-201ENST00000418784 283 ntBASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 SNX18P3-201ENST00000424993 835 ntBASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 AL513185.2-201ENST00000425543 193 ntBASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 FTH1P5-201ENST00000425761 545 ntBASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 TIMM9P3-201ENST00000428659 274 ntBASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 AL353898.1-201ENST00000444055 238 ntBASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 TDRG1-202ENST00000448433 1015 ntTSL 3 BASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 FTH1P7-201ENST00000450676 552 ntBASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 HMGB1P5-202ENST00000451497 985 ntBASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 RAD23BP3-201ENST00000454157 1152 ntBASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 CHIAP1-201ENST00000456220 995 ntBASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 CMAHP-203ENST00000458373 1101 ntTSL 5 BASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 RN7SL233P-201ENST00000469988 277 ntBASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 RPS29P25-201ENST00000481709 171 ntBASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 RN7SL332P-201ENST00000482163 254 ntBASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 RPS7P6-201ENST00000485777 579 ntBASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 DUTP7-201ENST00000507982 486 ntBASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 AC106774.2-201ENST00000510266 406 ntBASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 ATG10-208ENST00000513634 618 ntTSL 2 BASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 LINC02223-203ENST00000514771 781 ntTSL 5 BASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 AC008676.1-202ENST00000520658 545 ntTSL 4 BASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 KCTD9P4-201ENST00000526766 1166 ntBASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 OR7E96P-201ENST00000530816 976 ntBASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 AC126755.2-209ENST00000531453 699 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 AC138969.1-212ENST00000541593 699 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 EGLN3P1-201ENST00000541727 720 ntBASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 NPIPA5-203ENST00000543801 699 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 CMC2-213ENST00000565914 528 ntAPPRIS P1 TSL 3 BASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 MIR5705-201ENST00000579870 89 ntBASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 AC012640.3-201ENST00000607847 430 ntBASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 AC106872.5-201ENST00000508856 1416 ntBASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
LYSMD3Q7Z3D4 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 AC090643.1-201ENST00000623600 3100 ntBASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 AC090132.1-201ENST00000524071 1480 ntBASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 CHIC1-201ENST00000373502 4158 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 RNU6-621P-201ENST00000364752 109 ntBASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 SSX3-202ENST00000376893 800 ntTSL 2 BASIC7.56□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms