Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 RNU1-88P-201ENST00000459274 128 ntBASIC7.85□□□□□ -1.15
CPS1P31327 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC7.85□□□□□ -1.15
CPS1P31327 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC7.85□□□□□ -1.15
CPS1P31327 SLC25A15P5-201ENST00000508033 253 ntBASIC7.85□□□□□ -1.15
CPS1P31327 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC7.85□□□□□ -1.15
CPS1P31327 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CPS1P31327 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC7.85□□□□□ -1.15
CPS1P31327 MIR4270-201ENST00000581799 70 ntBASIC7.85□□□□□ -1.15
CPS1P31327 AC018809.2-201ENST00000602436 3823 ntBASIC7.85□□□□□ -1.15
CPS1P31327 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC7.85□□□□□ -1.15
CPS1P31327 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CPS1P31327 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CPS1P31327 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CPS1P31327 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CPS1P31327 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC7.85□□□□□ -1.15
CPS1P31327 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CPS1P31327 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC7.85□□□□□ -1.15
CPS1P31327 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CPS1P31327 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CPS1P31327 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
CPS1P31327 CC2D2A-204ENST00000503292 5175 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
CPS1P31327 AL008638.3-201ENST00000623027 5182 ntBASIC7.85□□□□□ -1.15
CPS1P31327 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC7.85□□□□□ -1.15
CPS1P31327 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CPS1P31327 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
CPS1P31327 OLMALINC-203ENST00000641087 3779 ntBASIC7.84□□□□□ -1.15
CPS1P31327 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC7.84□□□□□ -1.15
CPS1P31327 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
CPS1P31327 AP003175.1-201ENST00000641383 6658 ntBASIC7.84□□□□□ -1.15
CPS1P31327 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
CPS1P31327 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC7.84□□□□□ -1.15
CPS1P31327 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
CPS1P31327 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CPS1P31327 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC7.84□□□□□ -1.15
CPS1P31327 AC008072.1-201ENST00000434254 824 ntBASIC7.84□□□□□ -1.15
CPS1P31327 TRBV5-2-201ENST00000489095 273 ntBASIC7.84□□□□□ -1.15
CPS1P31327 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC7.84□□□□□ -1.15
CPS1P31327 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC7.84□□□□□ -1.15
CPS1P31327 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC7.84□□□□□ -1.15
CPS1P31327 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC7.84□□□□□ -1.15
CPS1P31327 BNIP3P22-201ENST00000593399 556 ntBASIC7.84□□□□□ -1.15
CPS1P31327 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC7.84□□□□□ -1.15
CPS1P31327 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CPS1P31327 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
CPS1P31327 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CPS1P31327 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CPS1P31327 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
CPS1P31327 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
CPS1P31327 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CPS1P31327 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CPS1P31327 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.16
CPS1P31327 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CPS1P31327 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CPS1P31327 RPL32P3-201ENST00000359025 275 ntBASIC7.83□□□□□ -1.16
CPS1P31327 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CPS1P31327 AC119751.6-201ENST00000416712 186 ntBASIC7.83□□□□□ -1.16
CPS1P31327 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC7.83□□□□□ -1.16
CPS1P31327 AC073264.2-201ENST00000448886 166 ntBASIC7.83□□□□□ -1.16
CPS1P31327 AC034205.1-201ENST00000520621 638 ntBASIC7.83□□□□□ -1.16
CPS1P31327 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC7.83□□□□□ -1.16
CPS1P31327 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
CPS1P31327 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC7.83□□□□□ -1.16
CPS1P31327 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC7.83□□□□□ -1.16
CPS1P31327 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC7.83□□□□□ -1.16
CPS1P31327 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC7.83□□□□□ -1.16
CPS1P31327 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC7.83□□□□□ -1.16
CPS1P31327 AP001885.1-201ENST00000621658 558 ntBASIC7.83□□□□□ -1.16
CPS1P31327 MVP-219ENST00000629059 120 ntTSL 5 BASIC7.83□□□□□ -1.16
CPS1P31327 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CPS1P31327 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
CPS1P31327 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
CPS1P31327 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
CPS1P31327 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC7.83□□□□□ -1.16
CPS1P31327 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC7.83□□□□□ -1.16
CPS1P31327 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CPS1P31327 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC7.83□□□□□ -1.16
CPS1P31327 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC7.83□□□□□ -1.16
CPS1P31327 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CPS1P31327 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
CPS1P31327 OR55B1P-203ENST00000641518 2602 ntBASIC7.83□□□□□ -1.16
CPS1P31327 CCDC162P-202ENST00000368966 6751 ntBASIC7.83□□□□□ -1.16
CPS1P31327 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CPS1P31327 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC7.83□□□□□ -1.16
CPS1P31327 SNURFL-201ENST00000309296 343 ntBASIC7.83□□□□□ -1.16
CPS1P31327 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC7.83□□□□□ -1.16
CPS1P31327 MIR551A-201ENST00000385042 96 ntBASIC7.83□□□□□ -1.16
CPS1P31327 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC7.83□□□□□ -1.16
CPS1P31327 RPS23P2-201ENST00000463671 415 ntBASIC7.83□□□□□ -1.16
CPS1P31327 AC096754.1-201ENST00000508904 818 ntBASIC7.83□□□□□ -1.16
CPS1P31327 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC7.83□□□□□ -1.16
CPS1P31327 AC009117.1-201ENST00000563948 554 ntBASIC7.83□□□□□ -1.16
CPS1P31327 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC7.83□□□□□ -1.16
CPS1P31327 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC7.82□□□□□ -1.16
CPS1P31327 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
CPS1P31327 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CPS1P31327 KCNMB3P1-202ENST00000493696 3389 ntBASIC7.82□□□□□ -1.16
CPS1P31327 AL034546.1-201ENST00000623740 3693 ntBASIC7.82□□□□□ -1.16
CPS1P31327 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC7.82□□□□□ -1.16
CPS1P31327 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC7.82□□□□□ -1.16
CPS1P31327 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC7.82□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms