Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 RNU6-1300P-201ENST00000391046 108 ntBASIC8.24□□□□□ -1.09
HOXA2O43364 RN7SKP137-201ENST00000411074 307 ntBASIC8.24□□□□□ -1.09
HOXA2O43364 RSU1P3-201ENST00000412878 835 ntBASIC8.24□□□□□ -1.09
HOXA2O43364 AL773545.3-201ENST00000414297 706 ntBASIC8.24□□□□□ -1.09
HOXA2O43364 RPL35P8-201ENST00000433284 337 ntBASIC8.24□□□□□ -1.09
HOXA2O43364 AL353754.1-201ENST00000440219 340 ntBASIC8.24□□□□□ -1.09
HOXA2O43364 MTCYBP6-201ENST00000441810 138 ntBASIC8.24□□□□□ -1.09
HOXA2O43364 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC8.24□□□□□ -1.09
HOXA2O43364 DNAJB5P1-201ENST00000454004 806 ntBASIC8.24□□□□□ -1.09
HOXA2O43364 AL139156.3-201ENST00000454802 394 ntBASIC8.24□□□□□ -1.09
HOXA2O43364 OR7E62P-201ENST00000456741 477 ntBASIC8.24□□□□□ -1.09
HOXA2O43364 AC135999.1-201ENST00000478962 479 ntBASIC8.24□□□□□ -1.09
HOXA2O43364 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC8.24□□□□□ -1.09
HOXA2O43364 RPL7AP30-201ENST00000482859 796 ntBASIC8.24□□□□□ -1.09
HOXA2O43364 AC008629.2-201ENST00000503783 483 ntBASIC8.24□□□□□ -1.09
HOXA2O43364 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC8.24□□□□□ -1.09
HOXA2O43364 RPL32P3-203ENST00000506593 498 ntTSL 5 BASIC8.24□□□□□ -1.09
HOXA2O43364 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC8.24□□□□□ -1.09
HOXA2O43364 BTG4P1-201ENST00000510421 183 ntBASIC8.24□□□□□ -1.09
HOXA2O43364 RNU6-416P-201ENST00000516265 103 ntBASIC8.24□□□□□ -1.09
HOXA2O43364 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC8.24□□□□□ -1.09
HOXA2O43364 RGS5-218ENST00000526176 574 ntTSL 4 BASIC8.24□□□□□ -1.09
HOXA2O43364 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
HOXA2O43364 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC8.24□□□□□ -1.09
HOXA2O43364 PSMA3P-201ENST00000555485 635 ntBASIC8.24□□□□□ -1.09
HOXA2O43364 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC8.24□□□□□ -1.09
HOXA2O43364 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC8.24□□□□□ -1.09
HOXA2O43364 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC8.24□□□□□ -1.09
HOXA2O43364 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC8.24□□□□□ -1.09
HOXA2O43364 AC006116.6-201ENST00000593258 1103 ntBASIC8.24□□□□□ -1.09
HOXA2O43364 AC125494.2-201ENST00000602431 657 ntBASIC8.24□□□□□ -1.09
HOXA2O43364 AC091488.1-201ENST00000604239 660 ntBASIC8.24□□□□□ -1.09
HOXA2O43364 AC024085.1-201ENST00000604299 432 ntBASIC8.24□□□□□ -1.09
HOXA2O43364 CUX2P1-201ENST00000606426 298 ntBASIC8.24□□□□□ -1.09
HOXA2O43364 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC8.24□□□□□ -1.09
HOXA2O43364 CNTNAP3P1-201ENST00000616657 906 ntBASIC8.24□□□□□ -1.09
HOXA2O43364 AL606760.4-201ENST00000617613 718 ntBASIC8.24□□□□□ -1.09
HOXA2O43364 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC8.24□□□□□ -1.09
HOXA2O43364 AC004014.2-201ENST00000623718 5122 ntBASIC8.24□□□□□ -1.09
HOXA2O43364 GPR156-201ENST00000315843 4193 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
HOXA2O43364 RTN4-206ENST00000394611 4161 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
HOXA2O43364 RECQL-203ENST00000421138 2572 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
HOXA2O43364 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
HOXA2O43364 ZHX3-218ENST00000560364 4283 ntTSL 5 BASIC8.24□□□□□ -1.09
HOXA2O43364 EIF4B-201ENST00000262056 4148 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
HOXA2O43364 DCAF6-202ENST00000367840 3349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
HOXA2O43364 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
HOXA2O43364 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
HOXA2O43364 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC8.24□□□□□ -1.09
HOXA2O43364 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
HOXA2O43364 FOLH1-213ENST00000533034 2225 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
HOXA2O43364 CPSF7-206ENST00000448745 1749 ntAPPRIS ALT1 TSL 5 BASIC8.23□□□□□ -1.09
HOXA2O43364 TNPO3-201ENST00000265388 4153 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
HOXA2O43364 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
HOXA2O43364 CFAP61-210ENST00000451767 1946 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
HOXA2O43364 AC006058.1-201ENST00000568686 5067 ntBASIC8.23□□□□□ -1.09
HOXA2O43364 LINC02009-201ENST00000635852 2951 ntTSL 3 BASIC8.23□□□□□ -1.09
HOXA2O43364 OPTN-203ENST00000378748 3521 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
HOXA2O43364 ADH6-203ENST00000394899 2802 ntAPPRIS ALT1 TSL 2 BASIC8.23□□□□□ -1.09
HOXA2O43364 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
HOXA2O43364 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
HOXA2O43364 HCP5-201ENST00000414046 2658 ntTSL 4 BASIC8.23□□□□□ -1.09
HOXA2O43364 AL590999.1-201ENST00000607675 3776 ntTSL 2 BASIC8.23□□□□□ -1.09
HOXA2O43364 GAPVD1-204ENST00000394083 4747 ntTSL 5 BASIC8.23□□□□□ -1.09
HOXA2O43364 OR56A4-201ENST00000330728 1209 ntBASIC8.23□□□□□ -1.09
HOXA2O43364 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC8.23□□□□□ -1.09
HOXA2O43364 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
HOXA2O43364 RNU6-483P-201ENST00000384088 108 ntBASIC8.23□□□□□ -1.09
HOXA2O43364 MIR555-201ENST00000384987 96 ntBASIC8.23□□□□□ -1.09
HOXA2O43364 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC8.23□□□□□ -1.09
HOXA2O43364 U3.31-201ENST00000408113 216 ntBASIC8.23□□□□□ -1.09
HOXA2O43364 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC8.23□□□□□ -1.09
HOXA2O43364 RPS3AP3-201ENST00000411933 242 ntBASIC8.23□□□□□ -1.09
HOXA2O43364 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
HOXA2O43364 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC8.23□□□□□ -1.09
HOXA2O43364 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
HOXA2O43364 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC8.23□□□□□ -1.09
HOXA2O43364 AC023141.10-201ENST00000415634 200 ntBASIC8.23□□□□□ -1.09
HOXA2O43364 MTCO3P12-201ENST00000416718 547 ntBASIC8.23□□□□□ -1.09
HOXA2O43364 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC8.23□□□□□ -1.09
HOXA2O43364 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC8.23□□□□□ -1.09
HOXA2O43364 SNX18P3-201ENST00000424993 835 ntBASIC8.23□□□□□ -1.09
HOXA2O43364 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC8.23□□□□□ -1.09
HOXA2O43364 AF274573.1-201ENST00000430535 494 ntBASIC8.23□□□□□ -1.09
HOXA2O43364 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC8.23□□□□□ -1.09
HOXA2O43364 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC8.23□□□□□ -1.09
HOXA2O43364 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC8.23□□□□□ -1.09
HOXA2O43364 RPS7P4-201ENST00000444127 582 ntBASIC8.23□□□□□ -1.09
HOXA2O43364 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC8.23□□□□□ -1.09
HOXA2O43364 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC8.23□□□□□ -1.09
HOXA2O43364 AC087312.1-201ENST00000471411 480 ntBASIC8.23□□□□□ -1.09
HOXA2O43364 ACTR3BP4-201ENST00000503033 1244 ntBASIC8.23□□□□□ -1.09
HOXA2O43364 CDH12P2-201ENST00000504393 298 ntBASIC8.23□□□□□ -1.09
HOXA2O43364 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC8.23□□□□□ -1.09
HOXA2O43364 Y_RNA.693-201ENST00000516641 110 ntBASIC8.23□□□□□ -1.09
HOXA2O43364 IGHVIII-11-1-201ENST00000522733 267 ntBASIC8.23□□□□□ -1.09
HOXA2O43364 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC8.23□□□□□ -1.09
HOXA2O43364 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC8.23□□□□□ -1.09
HOXA2O43364 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
HOXA2O43364 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC8.23□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms