Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 AP003396.4-201ENST00000527574 265 ntBASIC8.15□□□□□ -1.1
LOC102724428A0A0B4J2F2 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC8.15□□□□□ -1.1
LOC102724428A0A0B4J2F2 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
LOC102724428A0A0B4J2F2 RPA2P1-201ENST00000556557 721 ntBASIC8.15□□□□□ -1.1
LOC102724428A0A0B4J2F2 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC8.15□□□□□ -1.1
LOC102724428A0A0B4J2F2 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC8.15□□□□□ -1.1
LOC102724428A0A0B4J2F2 AC027281.1-201ENST00000574178 758 ntBASIC8.15□□□□□ -1.1
LOC102724428A0A0B4J2F2 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC8.15□□□□□ -1.1
LOC102724428A0A0B4J2F2 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
LOC102724428A0A0B4J2F2 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC8.15□□□□□ -1.1
LOC102724428A0A0B4J2F2 AC124312.4-201ENST00000605533 310 ntBASIC8.15□□□□□ -1.1
LOC102724428A0A0B4J2F2 AC009163.6-201ENST00000612367 342 ntBASIC8.15□□□□□ -1.1
LOC102724428A0A0B4J2F2 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC8.15□□□□□ -1.1
LOC102724428A0A0B4J2F2 AC245014.3-201ENST00000618589 347 ntBASIC8.15□□□□□ -1.1
LOC102724428A0A0B4J2F2 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC8.15□□□□□ -1.1
LOC102724428A0A0B4J2F2 UGP2-232ENST00000640075 567 ntTSL 5 BASIC8.15□□□□□ -1.1
LOC102724428A0A0B4J2F2 AC007998.4-201ENST00000612496 2533 ntBASIC8.15□□□□□ -1.1
LOC102724428A0A0B4J2F2 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC8.15□□□□□ -1.1
LOC102724428A0A0B4J2F2 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
LOC102724428A0A0B4J2F2 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC8.15□□□□□ -1.11
LOC102724428A0A0B4J2F2 MAPK10-377ENST00000642006 2752 ntBASIC8.15□□□□□ -1.11
LOC102724428A0A0B4J2F2 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
LOC102724428A0A0B4J2F2 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.11
LOC102724428A0A0B4J2F2 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 CAST-204ENST00000341926 2487 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 AC027514.1-201ENST00000588561 1603 ntBASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 AC087501.5-201ENST00000607496 2374 ntBASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 AC011503.2-201ENST00000594230 1500 ntBASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 AL359976.1-201ENST00000418655 3528 ntBASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 OR52B3P-201ENST00000314715 928 ntBASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 RNU6-304P-201ENST00000364855 107 ntBASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 AL353625.1-202ENST00000366273 571 ntBASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 SETP15-201ENST00000412724 337 ntBASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 BRWD1P3-201ENST00000428816 390 ntBASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 IFNNP1-201ENST00000429219 553 ntBASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 ISCA1P2-201ENST00000438679 421 ntBASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 AL360221.1-201ENST00000445989 335 ntBASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 OR52Y1P-201ENST00000452418 828 ntBASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 AC002553.3-201ENST00000453002 341 ntBASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 ACA64.1-201ENST00000459171 127 ntBASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 AC092691.2-201ENST00000461787 803 ntBASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 AC110749.1-201ENST00000462007 357 ntBASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 UBFD1P1-201ENST00000473259 814 ntBASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 AC114781.3-201ENST00000512083 142 ntBASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 CR383658.1-201ENST00000514609 734 ntBASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 RN7SKP248-201ENST00000516278 305 ntBASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 HMGB1P46-201ENST00000520062 610 ntBASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 AC069366.1-201ENST00000583159 838 ntBASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 AC009237.12-201ENST00000604755 742 ntBASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 AP000254.1-201ENST00000609934 520 ntBASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 AL354976.1-201ENST00000613843 387 ntBASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 AC022467.1-201ENST00000614738 749 ntBASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 MIR1322-201ENST00000638013 71 ntBASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 ZSWIM5P3-201ENST00000511265 2743 ntBASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
LOC102724428A0A0B4J2F2 AL139384.2-201ENST00000613809 3590 ntBASIC8.14□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms