Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AC016930.1-201ENST00000468766 2205 ntBASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 TNFAIP8-204ENST00000503646 2502 ntTSL 2 BASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 FHL1-216ENST00000535737 2325 ntTSL 3 BASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 USP32P2-201ENST00000412260 4329 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 EFHC1-233ENST00000637353 3829 ntTSL 5 BASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 EEF1A1P3-201ENST00000417549 1385 ntBASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 MORF4L2-210ENST00000451301 1830 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 AL031985.3-201ENST00000565390 2449 ntBASIC7.57□□□□□ -1.2
PCDHB11Q9Y5F2 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 RORA-202ENST00000309157 1908 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 AC092999.1-201ENST00000624004 1924 ntBASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 ASNSP6-201ENST00000592770 1618 ntBASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 CDC42-201ENST00000315554 1452 ntAPPRIS P5 TSL 1 (best) BASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 S100Z-201ENST00000317593 1468 ntAPPRIS P1 TSL 3 BASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 PDIK1L-202ENST00000374271 4279 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 EPHA7-201ENST00000369297 1885 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 ZSWIM5P3-201ENST00000511265 2743 ntBASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 RNU6-839P-201ENST00000363347 108 ntBASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 CARD17-201ENST00000375707 466 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 RNU6-877P-201ENST00000383868 107 ntBASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 RNA5SP105-201ENST00000391123 113 ntBASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 YWHAZP6-201ENST00000399764 738 ntBASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 PPP1R7-204ENST00000402734 883 ntTSL 3 BASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 YWHAZP3-201ENST00000415292 738 ntBASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 USP9YP27-201ENST00000418455 438 ntBASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 AC009303.1-201ENST00000426307 352 ntBASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 HSPD1P12-201ENST00000429127 1069 ntBASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 USP9YP9-201ENST00000429406 715 ntBASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 AJ006995.1-201ENST00000433344 572 ntTSL 3 BASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 RPL7P29-201ENST00000437151 728 ntBASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 PPIAP17-201ENST00000438507 471 ntBASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 AC007365.1-201ENST00000439964 627 ntTSL 2 BASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 AC104306.1-201ENST00000449702 371 ntBASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 AL592464.2-201ENST00000457440 607 ntTSL 2 BASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 AC234782.3-201ENST00000461229 433 ntBASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 RN7SL414P-201ENST00000469545 294 ntBASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 AC007849.1-201ENST00000469794 513 ntTSL 4 BASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 RPL15P21-201ENST00000495592 567 ntBASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 ZBED3-AS1-203ENST00000504506 702 ntTSL 3 BASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 HMGB1P29-201ENST00000505659 499 ntBASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 HMGN1P13-201ENST00000505795 138 ntBASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 AC131392.1-201ENST00000506490 633 ntBASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 AC138866.2-201ENST00000508650 584 ntBASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 AC008868.1-201ENST00000509786 737 ntBASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 GUSBP9-201ENST00000510138 584 ntBASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 RPL7L1P13-201ENST00000511702 739 ntBASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 AC105914.1-201ENST00000511798 226 ntBASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 MTND1P35-201ENST00000526739 508 ntBASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 RAB30-205ENST00000527633 792 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 AP001804.2-201ENST00000533932 910 ntBASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 AL031429.2-201ENST00000602605 649 ntBASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 AC005332.6-201ENST00000613178 446 ntBASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 CNTNAP3P1-201ENST00000616657 906 ntBASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 NPPA-AS1_1.1-201ENST00000622391 173 ntBASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 AC090574.1-201ENST00000623186 233 ntBASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 AP003068.4-201ENST00000623192 802 ntBASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 AC012557.3-201ENST00000626439 255 ntBASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 MIR1321-201ENST00000637766 79 ntBASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 BCL2L11-224ENST00000639340 243 ntTSL 5 BASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 ERAP2-201ENST00000379904 3219 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 NDUFS1-204ENST00000440274 2394 ntTSL 2 BASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 MAP4-209ENST00000434267 2772 ntTSL 2 BASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 RTL3-201ENST00000321110 2648 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 SLC25A24-202ENST00000370041 3404 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 PIGN-225ENST00000638435 4382 ntTSL 5 BASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC7.56□□□□□ -1.2
PCDHB11Q9Y5F2 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms