Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 ADAM2-205ENST00000521880 2125 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.91
PCDHB13Q9Y5F0 SLFN11-202ENST00000394566 5030 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
PCDHB13Q9Y5F0 MGAT5-202ENST00000409645 8252 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
PCDHB13Q9Y5F0 FRG2-201ENST00000378763 2084 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
PCDHB13Q9Y5F0 FRG2B-202ENST00000443774 2094 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
PCDHB13Q9Y5F0 SH3D19-202ENST00000409252 4888 ntAPPRIS P3 TSL 5 BASIC9.38□□□□□ -0.91
PCDHB13Q9Y5F0 AP002370.1-201ENST00000528055 1602 ntBASIC9.38□□□□□ -0.91
PCDHB13Q9Y5F0 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
PCDHB13Q9Y5F0 AC061975.7-201ENST00000592016 2692 ntBASIC9.38□□□□□ -0.91
PCDHB13Q9Y5F0 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PCDHB13Q9Y5F0 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 ZNF701-201ENST00000301093 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 CDC25C-203ENST00000415130 1556 ntTSL 5 BASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 AC008817.1-201ENST00000504215 1562 ntBASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 HCG18-238ENST00000449544 4262 ntTSL 2 BASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 SUPT16H-201ENST00000216297 4684 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 CABLES1-202ENST00000400473 1544 ntAPPRIS ALT2 TSL 2 BASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 AC019155.2-201ENST00000420224 1918 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 GDNF-AS1-203ENST00000514532 2913 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 CTNND1-221ENST00000529873 5931 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 CTNND1-227ENST00000530748 5925 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 SYTL4-204ENST00000372989 3885 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 ZNF569-202ENST00000392149 3689 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 ADGRE1-204ENST00000381407 2687 ntTSL 2 BASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 LINC02347-201ENST00000397346 2458 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 OR2T6-201ENST00000355728 927 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 RNU6-582P-201ENST00000362989 107 ntBASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 RNU6-1109P-201ENST00000391187 107 ntBASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 RN7SKP139-201ENST00000410411 293 ntBASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 AC008937.2-201ENST00000415589 619 ntTSL 3 BASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 BOLA3P4-201ENST00000418151 400 ntBASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 TMEM211-202ENST00000423535 695 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 RPL15P1-201ENST00000439981 600 ntBASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 RPL21P23-201ENST00000446654 460 ntBASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 AC104849.1-201ENST00000462623 405 ntBASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 RN7SL598P-201ENST00000494391 294 ntBASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 GUSBP3-201ENST00000509348 423 ntBASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 LINC00499-204ENST00000515282 579 ntTSL 5 BASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 RNU6-150P-201ENST00000516237 95 ntBASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 IGLVVI-25-1-201ENST00000521893 249 ntBASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 AC007375.2-201ENST00000557752 603 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 ELOF1-207ENST00000591674 679 ntTSL 2 BASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 RPL17P3-201ENST00000605695 525 ntBASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 AL590705.1-201ENST00000607322 484 ntTSL 4 BASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 MED24-234ENST00000614384 454 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 AC133104.2-201ENST00000615272 193 ntBASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 AL132821.1-201ENST00000616029 394 ntBASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 MIR3191-201ENST00000636300 76 ntBASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 KRT7-214ENST00000638501 398 ntTSL 5 BASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 GTF2A1-203ENST00000553612 6306 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 TNIK-210ENST00000470834 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 MDM2-202ENST00000258149 12633 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 CEBPZOS-204ENST00000402297 3158 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 ZMYND8-201ENST00000262975 4139 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 NOLC1-209ENST00000605788 3932 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 SYNE1-206ENST00000367253 5189 ntTSL 5 BASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 ZNF169-203ENST00000480716 2716 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 AC095038.1-201ENST00000429248 1591 ntBASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 BRDT-204ENST00000394530 3207 ntTSL 2 BASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 MELK-201ENST00000298048 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 CFAP61-210ENST00000451767 1946 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 AL021396.1-202ENST00000457707 1929 ntTSL 2 BASIC9.37□□□□□ -0.91
PCDHB13Q9Y5F0 C2orf91-201ENST00000378711 3721 ntAPPRIS P2 TSL 2 BASIC9.36□□□□□ -0.91
PCDHB13Q9Y5F0 PAX6-270ENST00000640368 6975 ntAPPRIS P4 TSL 5 BASIC9.36□□□□□ -0.91
PCDHB13Q9Y5F0 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC9.36□□□□□ -0.91
PCDHB13Q9Y5F0 C9orf72-206ENST00000619707 3339 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
PCDHB13Q9Y5F0 BTBD3-214ENST00000618296 4582 ntAPPRIS ALT1 TSL 1 (best) BASIC9.36□□□□□ -0.91
PCDHB13Q9Y5F0 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC9.36□□□□□ -0.91
PCDHB13Q9Y5F0 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC9.36□□□□□ -0.91
PCDHB13Q9Y5F0 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
PCDHB13Q9Y5F0 ASNSP3-201ENST00000451989 1306 ntBASIC9.36□□□□□ -0.91
PCDHB13Q9Y5F0 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC9.36□□□□□ -0.91
PCDHB13Q9Y5F0 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC9.36□□□□□ -0.91
PCDHB13Q9Y5F0 CPA4-202ENST00000445470 2718 ntTSL 2 BASIC9.36□□□□□ -0.91
PCDHB13Q9Y5F0 PAPD4-202ENST00000423041 3223 ntAPPRIS ALT1 TSL 1 (best) BASIC9.36□□□□□ -0.91
PCDHB13Q9Y5F0 CTNND1-206ENST00000415361 5832 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
PCDHB13Q9Y5F0 CTNND1-225ENST00000530094 5814 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
PCDHB13Q9Y5F0 NF1P8-201ENST00000415351 1461 ntBASIC9.36□□□□□ -0.91
PCDHB13Q9Y5F0 NELL1-201ENST00000298925 3329 ntAPPRIS ALT2 TSL 2 BASIC9.36□□□□□ -0.91
PCDHB13Q9Y5F0 SPINK6-201ENST00000325630 686 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
PCDHB13Q9Y5F0 IL37-205ENST00000353225 652 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
PCDHB13Q9Y5F0 Y_RNA.555-201ENST00000384673 110 ntBASIC9.36□□□□□ -0.91
PCDHB13Q9Y5F0 U3.18-201ENST00000390880 216 ntBASIC9.36□□□□□ -0.91
PCDHB13Q9Y5F0 GABRA1-202ENST00000393943 4686 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
PCDHB13Q9Y5F0 METTL15P3-201ENST00000415522 1221 ntBASIC9.36□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms