Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC7.42□□□□□ -1.22
CNTNAP3Q9BZ76 AL357055.3-201ENST00000421157 2459 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CNTNAP3Q9BZ76 HSPA8P17-201ENST00000427029 1382 ntBASIC7.42□□□□□ -1.22
CNTNAP3Q9BZ76 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CNTNAP3Q9BZ76 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CNTNAP3Q9BZ76 RARSP1-201ENST00000542842 1418 ntBASIC7.42□□□□□ -1.22
CNTNAP3Q9BZ76 AC027279.1-201ENST00000568885 4284 ntBASIC7.42□□□□□ -1.22
CNTNAP3Q9BZ76 AL390195.2-201ENST00000564771 2023 ntBASIC7.42□□□□□ -1.22
CNTNAP3Q9BZ76 FAM47C-201ENST00000358047 3270 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
CNTNAP3Q9BZ76 NCAPH-201ENST00000240423 2763 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
CNTNAP3Q9BZ76 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 CACNB2-201ENST00000282343 3524 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 EXOC4-201ENST00000253861 4185 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 PABPC1P9-201ENST00000426076 1612 ntBASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 CORIN-207ENST00000505909 3018 ntTSL 5 BASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 STRADA-233ENST00000638888 1718 ntTSL 5 BASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 MORF4L2-201ENST00000360458 1824 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 SLC11A2-202ENST00000262052 4132 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 CDKL5-202ENST00000379996 3449 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 UBE2V1-202ENST00000371657 1973 ntTSL 4 BASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 AL353132.1-201ENST00000415260 2043 ntBASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 AC011155.1-201ENST00000316512 456 ntBASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 SNORD35A-201ENST00000363389 86 ntBASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 SNORA10-201ENST00000384084 133 ntBASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 RNU6-297P-201ENST00000384636 107 ntBASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 LDHAP5-201ENST00000394996 622 ntBASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 TAF9BP1-201ENST00000396646 746 ntBASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 ZSCAN12P1-201ENST00000406489 419 ntBASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 RSU1P3-201ENST00000412878 835 ntBASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 RPS26P13-201ENST00000419030 330 ntBASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 SETP9-201ENST00000423837 832 ntBASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 PIP5K1P2-201ENST00000437005 1120 ntBASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 EMC3-AS1-205ENST00000438698 534 ntBASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 AC013399.1-201ENST00000450311 418 ntBASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 ACTR3P3-201ENST00000480448 893 ntBASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 RN7SL849P-201ENST00000485236 295 ntBASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 ZNF695-204ENST00000487338 826 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 RN7SL350P-201ENST00000492591 299 ntBASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 MINCR-206ENST00000524335 499 ntTSL 2 BASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 MIR4800-201ENST00000537353 80 ntBASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 AC019322.1-201ENST00000571869 389 ntBASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 AC061975.3-201ENST00000583209 244 ntBASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 AC036176.3-201ENST00000602456 418 ntBASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 MTCO2P22-201ENST00000603246 681 ntBASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 MARK3P1-201ENST00000604796 643 ntBASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 LINC01125-248ENST00000627284 700 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 LPAR6-202ENST00000378434 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 GOSR2-232ENST00000640051 3964 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 PIK3AP1-203ENST00000371110 3151 ntTSL 2 BASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 C1D-202ENST00000407324 1379 ntTSL 3 BASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 C7-201ENST00000313164 4257 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 VEZF1P1-201ENST00000423931 1541 ntBASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 FAM13A-218ENST00000511976 3579 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 FAR2-202ENST00000536681 3616 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 TMEM52B-203ENST00000381923 2601 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 NPIPB5-207ENST00000451409 3660 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 CREM-203ENST00000344351 1625 ntTSL 2 BASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 KIAA1257-205ENST00000515659 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 AC022400.3-201ENST00000399449 3810 ntTSL 5 BASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 MS4A6A-203ENST00000426738 1736 ntTSL 5 BASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 KARSP1-201ENST00000451871 1752 ntBASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 PPFIA2-204ENST00000541017 4192 ntTSL 2 BASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 SMAD5-AS1-201ENST00000297163 1816 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CNTNAP3Q9BZ76 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 TMPPE-202ENST00000416695 3451 ntAPPRIS ALT2 TSL 2 BASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 SH3D19-202ENST00000409252 4888 ntAPPRIS P3 TSL 5 BASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 LINC00467-201ENST00000423222 3508 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 C1orf158-203ENST00000614859 3549 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 ABCA11P-202ENST00000504019 2110 ntBASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 DUXAP8-204ENST00000447898 4136 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 CPA4-201ENST00000222482 2797 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 LTBP1-202ENST00000404525 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 THBS3-210ENST00000541576 3200 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 MEF2A-205ENST00000557942 5413 ntTSL 5 BASIC7.4□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 412.9 ms