Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 AL133215.3-201ENST00000609801 448 ntBASIC8.22□□□□□ -1.09
PHOX2BQ99453 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC8.22□□□□□ -1.09
PHOX2BQ99453 AL603758.1-201ENST00000618654 241 ntBASIC8.22□□□□□ -1.09
PHOX2BQ99453 AC063952.1-203ENST00000634410 658 ntBASIC8.22□□□□□ -1.09
PHOX2BQ99453 MIR1302-1-201ENST00000637932 143 ntBASIC8.22□□□□□ -1.09
PHOX2BQ99453 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
PHOX2BQ99453 RUNX1T1-203ENST00000396218 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC8.22□□□□□ -1.09
PHOX2BQ99453 AC138207.6-201ENST00000579164 1967 ntBASIC8.22□□□□□ -1.09
PHOX2BQ99453 CTNNA2-218ENST00000541047 2870 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
PHOX2BQ99453 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
PHOX2BQ99453 ABHD4-203ENST00000428304 3366 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
PHOX2BQ99453 ESCO2-201ENST00000305188 3922 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
PHOX2BQ99453 CPA4-201ENST00000222482 2797 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
PHOX2BQ99453 UGT2B26P-201ENST00000508672 1613 ntBASIC8.21□□□□□ -1.09
PHOX2BQ99453 PARP4P1-201ENST00000435945 2337 ntBASIC8.21□□□□□ -1.09
PHOX2BQ99453 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC8.21□□□□□ -1.09
PHOX2BQ99453 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
PHOX2BQ99453 ABCF2P1-201ENST00000465687 1867 ntBASIC8.21□□□□□ -1.09
PHOX2BQ99453 TXNRD1-208ENST00000525566 3836 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
PHOX2BQ99453 TTC26-202ENST00000430935 4198 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
PHOX2BQ99453 FBXO38-202ENST00000340253 4424 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
PHOX2BQ99453 SLC26A9-201ENST00000340781 4510 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
PHOX2BQ99453 HNRNPU-219ENST00000639628 4546 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
PHOX2BQ99453 LIMCH1-219ENST00000514096 3543 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
PHOX2BQ99453 LINC00663-203ENST00000586885 2546 ntBASIC8.21□□□□□ -1.1
PHOX2BQ99453 CKAP2P1-201ENST00000555477 2049 ntBASIC8.21□□□□□ -1.1
PHOX2BQ99453 MTCO1P9-201ENST00000505577 1534 ntBASIC8.21□□□□□ -1.1
PHOX2BQ99453 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC8.21□□□□□ -1.1
PHOX2BQ99453 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC8.21□□□□□ -1.1
PHOX2BQ99453 Y_RNA.315-201ENST00000365117 102 ntBASIC8.21□□□□□ -1.1
PHOX2BQ99453 RNU1-28P-201ENST00000383861 164 ntBASIC8.21□□□□□ -1.1
PHOX2BQ99453 RNU1-27P-201ENST00000383869 164 ntBASIC8.21□□□□□ -1.1
PHOX2BQ99453 RNU1-1-201ENST00000383925 164 ntBASIC8.21□□□□□ -1.1
PHOX2BQ99453 RNVU1-18-201ENST00000384010 164 ntBASIC8.21□□□□□ -1.1
PHOX2BQ99453 RNU1-2-201ENST00000384278 164 ntBASIC8.21□□□□□ -1.1
PHOX2BQ99453 RNU1-4-201ENST00000384659 164 ntBASIC8.21□□□□□ -1.1
PHOX2BQ99453 RNU1-3-201ENST00000384782 164 ntBASIC8.21□□□□□ -1.1
PHOX2BQ99453 LL22NC01-81G9.3-201ENST00000400221 992 ntTSL 2 BASIC8.21□□□□□ -1.1
PHOX2BQ99453 SLC2A11-205ENST00000403208 564 ntTSL 4 BASIC8.21□□□□□ -1.1
PHOX2BQ99453 VN1R8P-201ENST00000407739 893 ntBASIC8.21□□□□□ -1.1
PHOX2BQ99453 SNORA11D-201ENST00000408548 128 ntBASIC8.21□□□□□ -1.1
PHOX2BQ99453 SNORA11E-201ENST00000408778 128 ntBASIC8.21□□□□□ -1.1
PHOX2BQ99453 RN7SKP29-201ENST00000410957 272 ntBASIC8.21□□□□□ -1.1
PHOX2BQ99453 TGFB2-AS1-201ENST00000414452 557 ntTSL 3 BASIC8.21□□□□□ -1.1
PHOX2BQ99453 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC8.21□□□□□ -1.1
PHOX2BQ99453 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC8.21□□□□□ -1.1
PHOX2BQ99453 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC8.21□□□□□ -1.1
PHOX2BQ99453 AC018644.1-201ENST00000429934 551 ntBASIC8.21□□□□□ -1.1
PHOX2BQ99453 GTF2IP20-201ENST00000431663 360 ntBASIC8.21□□□□□ -1.1
PHOX2BQ99453 AC236972.2-201ENST00000434979 310 ntBASIC8.21□□□□□ -1.1
PHOX2BQ99453 SNRPEP7-201ENST00000438350 220 ntBASIC8.21□□□□□ -1.1
PHOX2BQ99453 RPL12P11-201ENST00000439970 501 ntBASIC8.21□□□□□ -1.1
PHOX2BQ99453 RPL23AP16-201ENST00000441715 421 ntBASIC8.21□□□□□ -1.1
PHOX2BQ99453 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC8.21□□□□□ -1.1
PHOX2BQ99453 HMGN1P36-201ENST00000446623 298 ntBASIC8.21□□□□□ -1.1
PHOX2BQ99453 RPL7P59-201ENST00000447700 943 ntBASIC8.21□□□□□ -1.1
PHOX2BQ99453 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC8.21□□□□□ -1.1
PHOX2BQ99453 AC080129.1-201ENST00000457815 406 ntTSL 3 BASIC8.21□□□□□ -1.1
PHOX2BQ99453 RN7SL370P-201ENST00000470869 295 ntBASIC8.21□□□□□ -1.1
PHOX2BQ99453 RNU2-46P-201ENST00000517038 113 ntBASIC8.21□□□□□ -1.1
PHOX2BQ99453 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC8.21□□□□□ -1.1
PHOX2BQ99453 AC090568.2-203ENST00000521433 579 ntTSL 4 BASIC8.21□□□□□ -1.1
PHOX2BQ99453 IGHVIII-82-201ENST00000522058 250 ntBASIC8.21□□□□□ -1.1
PHOX2BQ99453 PHBP17-201ENST00000528576 541 ntBASIC8.21□□□□□ -1.1
PHOX2BQ99453 AC115676.1-201ENST00000538416 329 ntTSL 3 BASIC8.21□□□□□ -1.1
PHOX2BQ99453 ORMDL2-203ENST00000548974 671 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
PHOX2BQ99453 CHEK2P2-201ENST00000554701 672 ntBASIC8.21□□□□□ -1.1
PHOX2BQ99453 AC104046.1-201ENST00000559487 406 ntBASIC8.21□□□□□ -1.1
PHOX2BQ99453 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC8.21□□□□□ -1.1
PHOX2BQ99453 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC8.21□□□□□ -1.1
PHOX2BQ99453 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC8.21□□□□□ -1.1
PHOX2BQ99453 APOC1-202ENST00000588750 689 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
PHOX2BQ99453 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC8.21□□□□□ -1.1
PHOX2BQ99453 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC8.21□□□□□ -1.1
PHOX2BQ99453 CKS1BP3-201ENST00000600888 237 ntBASIC8.21□□□□□ -1.1
PHOX2BQ99453 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC8.21□□□□□ -1.1
PHOX2BQ99453 AC097468.3-201ENST00000607956 456 ntBASIC8.21□□□□□ -1.1
PHOX2BQ99453 AL451049.1-201ENST00000608672 497 ntBASIC8.21□□□□□ -1.1
PHOX2BQ99453 RNU6ATAC35P-201ENST00000609276 444 ntBASIC8.21□□□□□ -1.1
PHOX2BQ99453 U1.40-201ENST00000610976 164 ntBASIC8.21□□□□□ -1.1
PHOX2BQ99453 U1.27-201ENST00000615842 164 ntBASIC8.21□□□□□ -1.1
PHOX2BQ99453 MIAT_exon5_1.1-201ENST00000618919 149 ntBASIC8.21□□□□□ -1.1
PHOX2BQ99453 AL109954.1-201ENST00000619495 557 ntTSL 4 BASIC8.21□□□□□ -1.1
PHOX2BQ99453 LINC01359-205ENST00000634604 1050 ntTSL 5 BASIC8.21□□□□□ -1.1
PHOX2BQ99453 AC183089.2-201ENST00000637931 916 ntBASIC8.21□□□□□ -1.1
PHOX2BQ99453 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC8.21□□□□□ -1.1
PHOX2BQ99453 ANAPC5-208ENST00000535482 2077 ntTSL 2 BASIC8.21□□□□□ -1.1
PHOX2BQ99453 AL512310.11-201ENST00000611741 1837 ntTSL 5 BASIC8.21□□□□□ -1.1
PHOX2BQ99453 EPS15L1-214ENST00000602009 3915 ntTSL 2 BASIC8.21□□□□□ -1.1
PHOX2BQ99453 GDNF-AS1-203ENST00000514532 2913 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
PHOX2BQ99453 DZANK1-203ENST00000357236 3739 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
PHOX2BQ99453 TMEM236-201ENST00000377495 5464 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
PHOX2BQ99453 AL021396.1-202ENST00000457707 1929 ntTSL 2 BASIC8.21□□□□□ -1.1
PHOX2BQ99453 OR51D1-202ENST00000641817 3561 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
PHOX2BQ99453 UNC79-201ENST00000256339 8400 ntAPPRIS P2 TSL 5 BASIC8.21□□□□□ -1.1
PHOX2BQ99453 GC-201ENST00000273951 1972 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
PHOX2BQ99453 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
PHOX2BQ99453 ZNF569-202ENST00000392149 3689 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
PHOX2BQ99453 TNPO3-205ENST00000627585 4514 ntTSL 2 BASIC8.21□□□□□ -1.1
PHOX2BQ99453 LRRC8B-206ENST00000640258 8034 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 229.9 ms