Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 Z95327.1-201ENST00000446082 482 ntBASIC2.38□□□□□ -2.03
USH2AO75445 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC2.38□□□□□ -2.03
USH2AO75445 OR52A4P-201ENST00000472867 958 ntBASIC2.38□□□□□ -2.03
USH2AO75445 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
USH2AO75445 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC2.38□□□□□ -2.03
USH2AO75445 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC2.38□□□□□ -2.03
USH2AO75445 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
USH2AO75445 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
USH2AO75445 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
USH2AO75445 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
USH2AO75445 MAST4-204ENST00000405643 7713 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
USH2AO75445 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
USH2AO75445 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
USH2AO75445 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC2.38□□□□□ -2.03
USH2AO75445 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
USH2AO75445 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
USH2AO75445 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
USH2AO75445 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
USH2AO75445 ARID1B-232ENST00000637904 5913 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
USH2AO75445 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
USH2AO75445 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
USH2AO75445 FAM32BP-201ENST00000344033 333 ntBASIC2.38□□□□□ -2.03
USH2AO75445 MIR1182-201ENST00000408363 97 ntBASIC2.38□□□□□ -2.03
USH2AO75445 TMEM183AP1-205ENST00000432739 290 ntBASIC2.38□□□□□ -2.03
USH2AO75445 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC2.38□□□□□ -2.03
USH2AO75445 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
USH2AO75445 AC139697.1-201ENST00000548429 745 ntBASIC2.38□□□□□ -2.03
USH2AO75445 OR11H3P-201ENST00000554547 982 ntBASIC2.38□□□□□ -2.03
USH2AO75445 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC2.38□□□□□ -2.03
USH2AO75445 AC139493.1-201ENST00000604368 397 ntBASIC2.38□□□□□ -2.03
USH2AO75445 AC135068.5-201ENST00000624197 983 ntBASIC2.38□□□□□ -2.03
USH2AO75445 ATP2B2-202ENST00000360273 8962 ntTSL 5 BASIC2.38□□□□□ -2.03
USH2AO75445 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
USH2AO75445 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC2.38□□□□□ -2.03
USH2AO75445 CYP27C1-201ENST00000335247 4401 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
USH2AO75445 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC2.38□□□□□ -2.03
USH2AO75445 RNF41-201ENST00000345093 5596 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
USH2AO75445 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC2.38□□□□□ -2.03
USH2AO75445 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC2.38□□□□□ -2.03
USH2AO75445 PLXNA2-201ENST00000367033 11444 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
USH2AO75445 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
USH2AO75445 AC007996.1-201ENST00000620414 2821 ntBASIC2.38□□□□□ -2.03
USH2AO75445 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
USH2AO75445 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC2.38□□□□□ -2.03
USH2AO75445 ZNF207-207ENST00000577908 4672 ntAPPRIS ALT1 TSL 5 BASIC2.38□□□□□ -2.03
USH2AO75445 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
USH2AO75445 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
USH2AO75445 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
USH2AO75445 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
USH2AO75445 NEK1-207ENST00000511633 5536 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
USH2AO75445 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
USH2AO75445 AC011369.2-201ENST00000624423 1567 ntBASIC2.37□□□□□ -2.03
USH2AO75445 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
USH2AO75445 RPS3AP25-201ENST00000411660 793 ntBASIC2.37□□□□□ -2.03
USH2AO75445 AC112498.1-201ENST00000444401 332 ntBASIC2.37□□□□□ -2.03
USH2AO75445 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC2.37□□□□□ -2.03
USH2AO75445 NIFKP7-201ENST00000503365 834 ntBASIC2.37□□□□□ -2.03
USH2AO75445 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC2.37□□□□□ -2.03
USH2AO75445 AC093840.1-201ENST00000511599 336 ntBASIC2.37□□□□□ -2.03
USH2AO75445 AC016550.3-201ENST00000515706 767 ntBASIC2.37□□□□□ -2.03
USH2AO75445 AC093014.1-201ENST00000548926 724 ntBASIC2.37□□□□□ -2.03
USH2AO75445 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC2.37□□□□□ -2.03
USH2AO75445 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC2.37□□□□□ -2.03
USH2AO75445 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC2.37□□□□□ -2.03
USH2AO75445 AC073091.2-201ENST00000603205 907 ntBASIC2.37□□□□□ -2.03
USH2AO75445 AC099494.2-201ENST00000623371 978 ntBASIC2.37□□□□□ -2.03
USH2AO75445 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC2.37□□□□□ -2.03
USH2AO75445 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC2.37□□□□□ -2.03
USH2AO75445 LGALS8-212ENST00000450372 6281 ntAPPRIS P4 TSL 1 (best) BASIC2.37□□□□□ -2.03
USH2AO75445 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
USH2AO75445 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC2.37□□□□□ -2.03
USH2AO75445 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
USH2AO75445 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
USH2AO75445 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
USH2AO75445 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
USH2AO75445 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC2.37□□□□□ -2.03
USH2AO75445 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC2.37□□□□□ -2.03
USH2AO75445 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
USH2AO75445 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
USH2AO75445 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC2.37□□□□□ -2.03
USH2AO75445 MBTD1-203ENST00000415868 5099 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
USH2AO75445 SALL4P7-201ENST00000555779 3120 ntBASIC2.37□□□□□ -2.03
USH2AO75445 SAMMSON-226ENST00000642089 1582 ntBASIC2.37□□□□□ -2.03
USH2AO75445 AP002991.2-201ENST00000623807 2801 ntBASIC2.37□□□□□ -2.03
USH2AO75445 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC2.37□□□□□ -2.03
USH2AO75445 VCAN-208ENST00000512590 5923 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
USH2AO75445 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
USH2AO75445 GAPDHP49-201ENST00000421421 961 ntBASIC2.37□□□□□ -2.03
USH2AO75445 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC2.37□□□□□ -2.03
USH2AO75445 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC2.37□□□□□ -2.03
USH2AO75445 AC116312.1-201ENST00000606841 314 ntBASIC2.37□□□□□ -2.03
USH2AO75445 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC2.37□□□□□ -2.03
USH2AO75445 TULP4-202ENST00000367097 11295 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
USH2AO75445 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
USH2AO75445 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC2.37□□□□□ -2.03
USH2AO75445 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
USH2AO75445 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC2.37□□□□□ -2.03
USH2AO75445 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC2.37□□□□□ -2.03
USH2AO75445 DHX40P1-201ENST00000588725 1412 ntBASIC2.37□□□□□ -2.03
USH2AO75445 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms