Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 RNA5SP96-201ENST00000516041 107 ntBASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 RNY3P15-201ENST00000516297 97 ntBASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 RNU6-764P-201ENST00000516396 105 ntBASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 RNU6-62P-201ENST00000516526 102 ntBASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 RNU6-635P-201ENST00000516651 102 ntBASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 AC084026.2-201ENST00000521101 642 ntTSL 3 BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 BMPR1APS2-201ENST00000527904 1012 ntBASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 OR5M2P-201ENST00000529003 936 ntBASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 AC022080.3-201ENST00000544433 482 ntBASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 AC137768.1-201ENST00000549998 553 ntBASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 AC079600.1-201ENST00000550326 297 ntBASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 TMEM106C-219ENST00000552546 742 ntTSL 4 BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 UBE2Q2P11-201ENST00000559691 205 ntBASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 AC044860.3-201ENST00000559957 368 ntBASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 AC233702.2-202ENST00000562547 291 ntBASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 AC244090.2-201ENST00000567614 792 ntBASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 AC006600.1-201ENST00000572529 153 ntBASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 MIR744-201ENST00000578242 98 ntBASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 AC022884.2-201ENST00000578535 580 ntBASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 AC021506.1-201ENST00000581971 597 ntTSL 5 BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 ACP5-208ENST00000590420 301 ntTSL 5 BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 AC009950.1-209ENST00000595586 777 ntTSL 5 BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 AC093503.1-202ENST00000598743 478 ntTSL 5 BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 AC008385.1-201ENST00000604421 355 ntBASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 AP002802.2-201ENST00000605877 235 ntBASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 AC087623.4-201ENST00000606593 695 ntBASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 AL136295.6-201ENST00000610486 658 ntBASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 AL135999.3-201ENST00000610501 812 ntBASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 LZTS1-204ENST00000616228 231 ntTSL 2 BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 AL445670.1-201ENST00000618889 801 ntBASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 AC068234.2-201ENST00000619646 522 ntBASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 AC138649.3-201ENST00000622154 254 ntBASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 AC016582.3-206ENST00000636547 207 ntBASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 BCL11A-204ENST00000359629 2427 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 POU6F2-210ENST00000559001 2403 ntTSL 5 BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 GABRP-203ENST00000518525 3576 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 AL359220.1-202ENST00000500036 4499 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 MTRF1-203ENST00000379480 2185 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 ZNF248-208ENST00000611278 4204 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 SLFN13-204ENST00000526861 6004 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 PIGN-251ENST00000640876 6045 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 LIN9-205ENST00000481685 1916 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 UBR4-202ENST00000375224 3475 ntTSL 2 BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 STK32B-204ENST00000510398 3241 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 CACNA1D-202ENST00000350061 7636 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 PTCD3-201ENST00000254630 6734 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 LINC00954-202ENST00000449086 2995 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 CUX1-201ENST00000292535 13747 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 MAPK10-285ENST00000641207 2746 ntBASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 HLTF-201ENST00000310053 5317 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 ZNF888-202ENST00000638862 4195 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 BCLAF3-203ENST00000379687 6528 ntAPPRIS P2 TSL 5 BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 DHFR2-201ENST00000314636 3927 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 THADA-205ENST00000404790 3043 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 R3HDM2P1-201ENST00000505381 1960 ntBASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 SLFN13-211ENST00000542635 5921 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 ITSN2-213ENST00000622089 5805 ntTSL 5 BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 PSMC1P7-201ENST00000495689 1315 ntBASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 LINC02367-201ENST00000567749 4388 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 AC008124.1-201ENST00000609803 9730 ntBASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 AMMECR1L-201ENST00000272647 4658 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 TMC1-202ENST00000340019 3068 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 AC006484.1-201ENST00000435086 1884 ntBASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 AC106712.1-201ENST00000483840 1888 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 ZNF322-201ENST00000415922 4817 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 RBMY1A1-201ENST00000303902 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms