Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 DEPDC1B-202ENST00000453022 1569 ntTSL 2 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 C1D-202ENST00000407324 1379 ntTSL 3 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 AC138915.4-201ENST00000565549 4147 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 ALDOB-203ENST00000616752 1391 ntTSL 5 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 CCL13-201ENST00000225844 851 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 C20orf173-201ENST00000246199 1034 ntAPPRIS ALT2 TSL 2 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 ORM1-201ENST00000259396 802 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 IL37-201ENST00000263326 772 ntAPPRIS P4 TSL 1 (best) BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 TPM3-201ENST00000271850 1219 ntAPPRIS ALT1 TSL 5 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 CRIP3-201ENST00000274990 800 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 TSSK4-201ENST00000287913 1257 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 TFF1-201ENST00000291527 551 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 SLN-201ENST00000305991 722 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 IL37-202ENST00000311328 652 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 GAPDHP24-201ENST00000328713 983 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 OR2T10-201ENST00000330500 1049 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 OR5D18-201ENST00000333976 991 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 LAIR2-202ENST00000351841 538 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 RAB19-201ENST00000356407 822 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 OR51D1-201ENST00000357605 1124 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 U8.3-201ENST00000363321 132 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 Y_RNA.142-201ENST00000363491 102 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 Y_RNA.157-201ENST00000363638 102 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 RNA5SP349-201ENST00000363743 109 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 RNY3P3-201ENST00000363816 102 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 AL353662.2-201ENST00000372214 645 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 PBDC1-202ENST00000373358 1201 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 APOO-201ENST00000379226 1118 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 GYG2P1-203ENST00000382965 149 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 RNU1-39P-201ENST00000383897 165 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 RNU6-225P-201ENST00000384613 103 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 SNORD83A-201ENST00000386747 95 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 IGHV2-5-201ENST00000390597 378 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 RNU1-149P-201ENST00000390870 161 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 S100A13-202ENST00000392622 547 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 ZNF35-203ENST00000399560 564 ntTSL 4 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 OR4F1P-201ENST00000405102 938 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 RNU6-908P-201ENST00000410160 94 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 RNU6-272P-201ENST00000411028 104 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 AL589763.1-201ENST00000412257 791 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 AC007179.2-205ENST00000412409 707 ntTSL 3 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 RSU1P3-201ENST00000412878 835 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 AMD1P2-201ENST00000412936 992 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 RPL7L1P12-201ENST00000417594 729 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 AL354732.1-204ENST00000421020 755 ntTSL 3 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 PROSER3-203ENST00000421853 650 ntAPPRIS ALT2 TSL 3 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 AL035045.1-201ENST00000425405 632 ntTSL 3 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 AC009495.3-201ENST00000425688 779 ntTSL 3 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 AC114402.1-201ENST00000427282 328 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 AC008850.1-201ENST00000427546 362 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 GRM7-AS2-201ENST00000427748 520 ntTSL 2 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 ELOA-AS1-201ENST00000427796 1074 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 AP001630.1-201ENST00000428410 437 ntTSL 2 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 SAR1AP4-201ENST00000429225 591 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 ATP5HP2-201ENST00000433885 485 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 MTPN-202ENST00000435723 879 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 ZNF175-202ENST00000436511 488 ntTSL 2 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 ARPC3P1-201ENST00000437218 533 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 RSU1P2-202ENST00000437884 485 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 MAP1LC3BP1-202ENST00000438342 516 ntTSL 3 BASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms