Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
ABCA3Q99758 AC104581.5-201ENST00000624171 7141 ntBASIC7.24□□□□□ -1.25
ABCA3Q99758 ERG-202ENST00000398897 4651 ntTSL 5 BASIC7.24□□□□□ -1.25
ABCA3Q99758 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC7.24□□□□□ -1.25
ABCA3Q99758 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
ABCA3Q99758 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC7.24□□□□□ -1.25
ABCA3Q99758 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC7.24□□□□□ -1.25
ABCA3Q99758 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC7.24□□□□□ -1.25
ABCA3Q99758 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC7.24□□□□□ -1.25
ABCA3Q99758 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
ABCA3Q99758 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
ABCA3Q99758 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
ABCA3Q99758 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC7.24□□□□□ -1.25
ABCA3Q99758 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC7.24□□□□□ -1.25
ABCA3Q99758 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
ABCA3Q99758 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
ABCA3Q99758 GAPDHP15-201ENST00000398586 975 ntBASIC7.24□□□□□ -1.25
ABCA3Q99758 RPL31P44-201ENST00000447680 377 ntBASIC7.24□□□□□ -1.25
ABCA3Q99758 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC7.24□□□□□ -1.25
ABCA3Q99758 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC7.24□□□□□ -1.25
ABCA3Q99758 RN7SKP253-201ENST00000516424 309 ntBASIC7.24□□□□□ -1.25
ABCA3Q99758 OR5AM1P-201ENST00000532136 1032 ntBASIC7.24□□□□□ -1.25
ABCA3Q99758 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC7.24□□□□□ -1.25
ABCA3Q99758 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC7.24□□□□□ -1.25
ABCA3Q99758 AC137695.1-201ENST00000604126 489 ntBASIC7.24□□□□□ -1.25
ABCA3Q99758 NANOGP3-201ENST00000605855 286 ntBASIC7.24□□□□□ -1.25
ABCA3Q99758 AP003789.1-201ENST00000617737 605 ntBASIC7.24□□□□□ -1.25
ABCA3Q99758 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
ABCA3Q99758 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
ABCA3Q99758 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
ABCA3Q99758 KALRN-202ENST00000291478 10888 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
ABCA3Q99758 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC7.23□□□□□ -1.25
ABCA3Q99758 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC7.23□□□□□ -1.25
ABCA3Q99758 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
ABCA3Q99758 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC7.23□□□□□ -1.25
ABCA3Q99758 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
ABCA3Q99758 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
ABCA3Q99758 AC009962.1-201ENST00000567327 3813 ntBASIC7.23□□□□□ -1.25
ABCA3Q99758 HLTF-201ENST00000310053 5317 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
ABCA3Q99758 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
ABCA3Q99758 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
ABCA3Q99758 AC007996.1-201ENST00000620414 2821 ntBASIC7.23□□□□□ -1.25
ABCA3Q99758 FAM3C2-201ENST00000312214 681 ntBASIC7.23□□□□□ -1.25
ABCA3Q99758 MIR105-1-201ENST00000385222 81 ntBASIC7.23□□□□□ -1.25
ABCA3Q99758 AL078599.1-201ENST00000402075 293 ntBASIC7.23□□□□□ -1.25
ABCA3Q99758 AC093655.2-201ENST00000425735 631 ntBASIC7.23□□□□□ -1.25
ABCA3Q99758 VN1R21P-201ENST00000426703 765 ntBASIC7.23□□□□□ -1.25
ABCA3Q99758 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC7.23□□□□□ -1.25
ABCA3Q99758 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC7.23□□□□□ -1.25
ABCA3Q99758 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC7.23□□□□□ -1.25
ABCA3Q99758 AC005000.1-201ENST00000536192 288 ntBASIC7.23□□□□□ -1.25
ABCA3Q99758 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC7.23□□□□□ -1.25
ABCA3Q99758 AC007346.2-201ENST00000564816 892 ntBASIC7.23□□□□□ -1.25
ABCA3Q99758 UBE2FP2-201ENST00000566646 462 ntBASIC7.23□□□□□ -1.25
ABCA3Q99758 MIR4737-201ENST00000583979 81 ntBASIC7.23□□□□□ -1.25
ABCA3Q99758 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC7.23□□□□□ -1.25
ABCA3Q99758 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC7.23□□□□□ -1.25
ABCA3Q99758 AC010435.1-201ENST00000623353 1177 ntBASIC7.23□□□□□ -1.25
ABCA3Q99758 CASC22-202ENST00000628396 802 ntTSL 5 BASIC7.23□□□□□ -1.25
ABCA3Q99758 AL356317.1-201ENST00000396110 1436 ntBASIC7.23□□□□□ -1.25
ABCA3Q99758 ATM-215ENST00000530958 5718 ntTSL 2 BASIC7.23□□□□□ -1.25
ABCA3Q99758 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC7.23□□□□□ -1.25
ABCA3Q99758 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC7.23□□□□□ -1.25
ABCA3Q99758 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
ABCA3Q99758 NXF4-202ENST00000416098 1465 ntBASIC7.23□□□□□ -1.25
ABCA3Q99758 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC7.23□□□□□ -1.25
ABCA3Q99758 AC132825.1-201ENST00000463573 2247 ntBASIC7.23□□□□□ -1.25
ABCA3Q99758 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
ABCA3Q99758 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
ABCA3Q99758 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
ABCA3Q99758 HSPD1P7-201ENST00000447985 1686 ntBASIC7.22□□□□□ -1.25
ABCA3Q99758 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC7.22□□□□□ -1.25
ABCA3Q99758 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC7.22□□□□□ -1.25
ABCA3Q99758 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
ABCA3Q99758 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
ABCA3Q99758 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC7.22□□□□□ -1.25
ABCA3Q99758 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC7.22□□□□□ -1.25
ABCA3Q99758 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC7.22□□□□□ -1.25
ABCA3Q99758 AC021106.1-201ENST00000509020 1058 ntBASIC7.22□□□□□ -1.25
ABCA3Q99758 TOMM22P4-201ENST00000511318 336 ntBASIC7.22□□□□□ -1.25
ABCA3Q99758 BTF3P13-201ENST00000513224 490 ntBASIC7.22□□□□□ -1.25
ABCA3Q99758 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC7.22□□□□□ -1.25
ABCA3Q99758 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
ABCA3Q99758 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
ABCA3Q99758 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
ABCA3Q99758 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
ABCA3Q99758 AC067852.5-201ENST00000589299 310 ntBASIC7.22□□□□□ -1.25
ABCA3Q99758 MTCO1P1-201ENST00000624263 1081 ntBASIC7.22□□□□□ -1.25
ABCA3Q99758 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
ABCA3Q99758 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
ABCA3Q99758 NLRP3P1-201ENST00000622303 1785 ntBASIC7.22□□□□□ -1.25
ABCA3Q99758 MIPEPP2-201ENST00000422560 1819 ntBASIC7.22□□□□□ -1.25
ABCA3Q99758 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
ABCA3Q99758 AL353796.1-201ENST00000561542 3241 ntBASIC7.22□□□□□ -1.25
ABCA3Q99758 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
ABCA3Q99758 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC7.22□□□□□ -1.25
ABCA3Q99758 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
ABCA3Q99758 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
ABCA3Q99758 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
ABCA3Q99758 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms