Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 HSPD1P9-201ENST00000420325 1636 ntBASIC7.33□□□□□ -1.24
DDX11Q96FC9 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC7.33□□□□□ -1.24
DDX11Q96FC9 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
DDX11Q96FC9 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
DDX11Q96FC9 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
DDX11Q96FC9 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
DDX11Q96FC9 AC027575.3-201ENST00000583058 2747 ntBASIC7.33□□□□□ -1.24
DDX11Q96FC9 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
DDX11Q96FC9 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC7.33□□□□□ -1.24
DDX11Q96FC9 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC7.33□□□□□ -1.24
DDX11Q96FC9 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
DDX11Q96FC9 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC7.33□□□□□ -1.24
DDX11Q96FC9 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
DDX11Q96FC9 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
DDX11Q96FC9 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
DDX11Q96FC9 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
DDX11Q96FC9 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
DDX11Q96FC9 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
DDX11Q96FC9 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC7.32□□□□□ -1.24
DDX11Q96FC9 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC7.32□□□□□ -1.24
DDX11Q96FC9 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
DDX11Q96FC9 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC7.32□□□□□ -1.24
DDX11Q96FC9 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
DDX11Q96FC9 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
DDX11Q96FC9 LCN1P2-201ENST00000372030 223 ntBASIC7.32□□□□□ -1.24
DDX11Q96FC9 AL360271.1-201ENST00000395679 510 ntBASIC7.32□□□□□ -1.24
DDX11Q96FC9 RN7SKP108-201ENST00000411367 328 ntBASIC7.32□□□□□ -1.24
DDX11Q96FC9 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC7.32□□□□□ -1.24
DDX11Q96FC9 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
DDX11Q96FC9 RPS7P14-201ENST00000426405 583 ntBASIC7.32□□□□□ -1.24
DDX11Q96FC9 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC7.32□□□□□ -1.24
DDX11Q96FC9 AC112492.2-201ENST00000432774 1030 ntBASIC7.32□□□□□ -1.24
DDX11Q96FC9 NPM1P48-201ENST00000436002 853 ntBASIC7.32□□□□□ -1.24
DDX11Q96FC9 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
DDX11Q96FC9 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
DDX11Q96FC9 AC073594.1-201ENST00000462065 364 ntBASIC7.32□□□□□ -1.24
DDX11Q96FC9 RPL12P31-201ENST00000478433 450 ntBASIC7.32□□□□□ -1.24
DDX11Q96FC9 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC7.32□□□□□ -1.24
DDX11Q96FC9 KHDC1P1-201ENST00000511053 508 ntBASIC7.32□□□□□ -1.24
DDX11Q96FC9 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC7.32□□□□□ -1.24
DDX11Q96FC9 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC7.32□□□□□ -1.24
DDX11Q96FC9 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
DDX11Q96FC9 RN7SKP35-201ENST00000517210 151 ntBASIC7.32□□□□□ -1.24
DDX11Q96FC9 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC7.32□□□□□ -1.24
DDX11Q96FC9 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC7.32□□□□□ -1.24
DDX11Q96FC9 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC7.32□□□□□ -1.24
DDX11Q96FC9 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC7.32□□□□□ -1.24
DDX11Q96FC9 MTCO1P47-201ENST00000523889 1271 ntBASIC7.32□□□□□ -1.24
DDX11Q96FC9 UBTFL10-201ENST00000528532 562 ntBASIC7.32□□□□□ -1.24
DDX11Q96FC9 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC7.32□□□□□ -1.24
DDX11Q96FC9 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
DDX11Q96FC9 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC7.32□□□□□ -1.24
DDX11Q96FC9 AC090286.3-201ENST00000573133 187 ntBASIC7.32□□□□□ -1.24
DDX11Q96FC9 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC7.32□□□□□ -1.24
DDX11Q96FC9 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC7.32□□□□□ -1.24
DDX11Q96FC9 AC084824.4-201ENST00000620106 731 ntBASIC7.32□□□□□ -1.24
DDX11Q96FC9 MIR7159-201ENST00000620587 66 ntBASIC7.32□□□□□ -1.24
DDX11Q96FC9 AC097460.3-201ENST00000623099 442 ntBASIC7.32□□□□□ -1.24
DDX11Q96FC9 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
DDX11Q96FC9 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC7.32□□□□□ -1.24
DDX11Q96FC9 AC009135.2-201ENST00000624136 1768 ntBASIC7.32□□□□□ -1.24
DDX11Q96FC9 MAPK10-261ENST00000641050 3109 ntBASIC7.32□□□□□ -1.24
DDX11Q96FC9 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
DDX11Q96FC9 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
DDX11Q96FC9 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
DDX11Q96FC9 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
DDX11Q96FC9 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
DDX11Q96FC9 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
DDX11Q96FC9 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
DDX11Q96FC9 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
DDX11Q96FC9 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
DDX11Q96FC9 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
DDX11Q96FC9 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC7.31□□□□□ -1.24
DDX11Q96FC9 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
DDX11Q96FC9 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC7.31□□□□□ -1.24
DDX11Q96FC9 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
DDX11Q96FC9 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC7.31□□□□□ -1.24
DDX11Q96FC9 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC7.31□□□□□ -1.24
DDX11Q96FC9 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC7.31□□□□□ -1.24
DDX11Q96FC9 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC7.31□□□□□ -1.24
DDX11Q96FC9 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC7.31□□□□□ -1.24
DDX11Q96FC9 snoU109.3-201ENST00000459477 145 ntBASIC7.31□□□□□ -1.24
DDX11Q96FC9 AC018638.3-201ENST00000461273 132 ntBASIC7.31□□□□□ -1.24
DDX11Q96FC9 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC7.31□□□□□ -1.24
DDX11Q96FC9 RN7SL369P-201ENST00000477138 299 ntBASIC7.31□□□□□ -1.24
DDX11Q96FC9 AC093720.1-201ENST00000505681 714 ntBASIC7.31□□□□□ -1.24
DDX11Q96FC9 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC7.31□□□□□ -1.24
DDX11Q96FC9 IGHV4-55-201ENST00000520889 368 ntBASIC7.31□□□□□ -1.24
DDX11Q96FC9 AC104115.2-201ENST00000523026 687 ntBASIC7.31□□□□□ -1.24
DDX11Q96FC9 SOX5P1-201ENST00000524155 1127 ntBASIC7.31□□□□□ -1.24
DDX11Q96FC9 AC027369.2-201ENST00000528030 440 ntBASIC7.31□□□□□ -1.24
DDX11Q96FC9 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
DDX11Q96FC9 OR4A6P-201ENST00000534364 970 ntBASIC7.31□□□□□ -1.24
DDX11Q96FC9 ASB8-203ENST00000535988 679 ntTSL 2 BASIC7.31□□□□□ -1.24
DDX11Q96FC9 AC092865.1-201ENST00000544395 1023 ntBASIC7.31□□□□□ -1.24
DDX11Q96FC9 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
DDX11Q96FC9 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC7.31□□□□□ -1.24
DDX11Q96FC9 AC068620.3-201ENST00000602749 560 ntBASIC7.31□□□□□ -1.24
DDX11Q96FC9 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC7.31□□□□□ -1.24
DDX11Q96FC9 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC7.31□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms