Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 NCOR1P3-201ENST00000420479 303 ntBASIC8.07□□□□□ -1.12
HLA-CQ95604 AL354732.1-204ENST00000421020 755 ntTSL 3 BASIC8.07□□□□□ -1.12
HLA-CQ95604 RPL7P56-201ENST00000429441 717 ntBASIC8.07□□□□□ -1.12
HLA-CQ95604 AL513175.1-201ENST00000431492 780 ntBASIC8.07□□□□□ -1.12
HLA-CQ95604 BMS1P19-201ENST00000433925 393 ntBASIC8.07□□□□□ -1.12
HLA-CQ95604 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC8.07□□□□□ -1.12
HLA-CQ95604 SKP1P1-201ENST00000438081 489 ntBASIC8.07□□□□□ -1.12
HLA-CQ95604 MTND3P2-201ENST00000438452 342 ntBASIC8.07□□□□□ -1.12
HLA-CQ95604 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC8.07□□□□□ -1.12
HLA-CQ95604 AL137074.1-201ENST00000442640 465 ntBASIC8.07□□□□□ -1.12
HLA-CQ95604 SPRYD7P1-201ENST00000443861 570 ntBASIC8.07□□□□□ -1.12
HLA-CQ95604 AL161454.1-201ENST00000446226 569 ntBASIC8.07□□□□□ -1.12
HLA-CQ95604 ARPC3P5-201ENST00000448802 534 ntBASIC8.07□□□□□ -1.12
HLA-CQ95604 NPM1P39-201ENST00000449818 867 ntBASIC8.07□□□□□ -1.12
HLA-CQ95604 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
HLA-CQ95604 AC093799.1-201ENST00000452411 499 ntBASIC8.07□□□□□ -1.12
HLA-CQ95604 RN7SL149P-201ENST00000465197 281 ntBASIC8.07□□□□□ -1.12
HLA-CQ95604 IGBP1P4-201ENST00000503202 879 ntBASIC8.07□□□□□ -1.12
HLA-CQ95604 RNY4P37-201ENST00000516225 96 ntBASIC8.07□□□□□ -1.12
HLA-CQ95604 AC084337.1-201ENST00000524809 686 ntBASIC8.07□□□□□ -1.12
HLA-CQ95604 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC8.07□□□□□ -1.12
HLA-CQ95604 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC8.07□□□□□ -1.12
HLA-CQ95604 AP002812.4-201ENST00000532139 286 ntBASIC8.07□□□□□ -1.12
HLA-CQ95604 ZNF322P1-201ENST00000568013 1209 ntBASIC8.07□□□□□ -1.12
HLA-CQ95604 AC034268.2-201ENST00000571784 482 ntBASIC8.07□□□□□ -1.12
HLA-CQ95604 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC8.07□□□□□ -1.12
HLA-CQ95604 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC8.07□□□□□ -1.12
HLA-CQ95604 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC8.07□□□□□ -1.12
HLA-CQ95604 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC8.07□□□□□ -1.12
HLA-CQ95604 AC140658.6-201ENST00000603958 201 ntBASIC8.07□□□□□ -1.12
HLA-CQ95604 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC8.07□□□□□ -1.12
HLA-CQ95604 CNTNAP3P1-201ENST00000616657 906 ntBASIC8.07□□□□□ -1.12
HLA-CQ95604 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC8.07□□□□□ -1.12
HLA-CQ95604 AL355974.3-201ENST00000617383 467 ntBASIC8.07□□□□□ -1.12
HLA-CQ95604 uc_338.37-201ENST00000620113 186 ntBASIC8.07□□□□□ -1.12
HLA-CQ95604 AC024580.1-201ENST00000623020 674 ntBASIC8.07□□□□□ -1.12
HLA-CQ95604 AC139792.3-201ENST00000623525 224 ntBASIC8.07□□□□□ -1.12
HLA-CQ95604 BANCR-201ENST00000624238 473 ntTSL 2 BASIC8.07□□□□□ -1.12
HLA-CQ95604 ARMC3-201ENST00000298032 2811 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
HLA-CQ95604 MYB-235ENST00000533624 1818 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
HLA-CQ95604 MYB-238ENST00000534044 1812 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
HLA-CQ95604 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
HLA-CQ95604 AL049839.2-201ENST00000553947 3067 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
HLA-CQ95604 CTNNA2-201ENST00000343114 2927 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
HLA-CQ95604 PDXDC1-203ENST00000450288 4171 ntTSL 5 BASIC8.07□□□□□ -1.12
HLA-CQ95604 CLRN1-AS1-202ENST00000476886 2223 ntTSL 2 BASIC8.07□□□□□ -1.12
HLA-CQ95604 HLA-DOA-201ENST00000229829 3489 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
HLA-CQ95604 CYFIP2-210ENST00000522463 3477 ntTSL 2 BASIC8.07□□□□□ -1.12
HLA-CQ95604 ZNF708-201ENST00000356929 4004 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
HLA-CQ95604 SERPINA6-201ENST00000341584 1534 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
HLA-CQ95604 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
HLA-CQ95604 AC100771.2-201ENST00000525833 1350 ntTSL 3 BASIC8.07□□□□□ -1.12
HLA-CQ95604 PTPRB-208ENST00000550358 6583 ntTSL 2 BASIC8.07□□□□□ -1.12
HLA-CQ95604 AL035555.1-201ENST00000404462 1790 ntBASIC8.07□□□□□ -1.12
HLA-CQ95604 NOTCH2-207ENST00000602566 5046 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
HLA-CQ95604 PCDH15-229ENST00000616114 5846 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
HLA-CQ95604 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
HLA-CQ95604 TP53BP1-203ENST00000382044 10384 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
HLA-CQ95604 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
HLA-CQ95604 PHLPP2-206ENST00000568954 8317 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
HLA-CQ95604 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC8.06□□□□□ -1.12
HLA-CQ95604 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
HLA-CQ95604 WARS-204ENST00000392882 2938 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
HLA-CQ95604 NEK6-204ENST00000373603 3447 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
HLA-CQ95604 ARHGAP42P1-201ENST00000507474 1976 ntBASIC8.06□□□□□ -1.12
HLA-CQ95604 DNTT-202ENST00000630152 1954 ntAPPRIS ALT1 TSL 1 (best) BASIC8.06□□□□□ -1.12
HLA-CQ95604 AC008966.1-203ENST00000499459 3137 ntTSL 2 BASIC8.06□□□□□ -1.12
HLA-CQ95604 WDR7-202ENST00000357574 7213 ntTSL 5 BASIC8.06□□□□□ -1.12
HLA-CQ95604 ELF4-202ENST00000335997 4145 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
HLA-CQ95604 PIGN-230ENST00000638977 4601 ntTSL 5 BASIC8.06□□□□□ -1.12
HLA-CQ95604 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
HLA-CQ95604 KAT6A-203ENST00000406337 9241 ntAPPRIS P3 TSL 5 BASIC8.06□□□□□ -1.12
HLA-CQ95604 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
HLA-CQ95604 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
HLA-CQ95604 RGS8-203ENST00000367557 859 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
HLA-CQ95604 CBWD5-205ENST00000377395 1143 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
HLA-CQ95604 RNU1-11P-201ENST00000383975 164 ntBASIC8.06□□□□□ -1.12
HLA-CQ95604 U8.14-201ENST00000390843 143 ntBASIC8.06□□□□□ -1.12
HLA-CQ95604 RN7SKP129-201ENST00000410288 299 ntBASIC8.06□□□□□ -1.12
HLA-CQ95604 AL450992.3-201ENST00000413192 568 ntBASIC8.06□□□□□ -1.12
HLA-CQ95604 AC004987.3-201ENST00000413879 771 ntBASIC8.06□□□□□ -1.12
HLA-CQ95604 AC006455.4-201ENST00000418297 528 ntTSL 4 BASIC8.06□□□□□ -1.12
HLA-CQ95604 AC093084.1-201ENST00000424233 687 ntBASIC8.06□□□□□ -1.12
HLA-CQ95604 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC8.06□□□□□ -1.12
HLA-CQ95604 KLF7-IT1-201ENST00000428777 655 ntTSL 2 BASIC8.06□□□□□ -1.12
HLA-CQ95604 PSMD10P2-201ENST00000432890 672 ntBASIC8.06□□□□□ -1.12
HLA-CQ95604 RPL7P29-201ENST00000437151 728 ntBASIC8.06□□□□□ -1.12
HLA-CQ95604 AC123904.1-201ENST00000441072 368 ntBASIC8.06□□□□□ -1.12
HLA-CQ95604 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC8.06□□□□□ -1.12
HLA-CQ95604 AC073188.4-201ENST00000450077 528 ntTSL 4 BASIC8.06□□□□□ -1.12
HLA-CQ95604 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC8.06□□□□□ -1.12
HLA-CQ95604 AC233279.1-201ENST00000455300 423 ntBASIC8.06□□□□□ -1.12
HLA-CQ95604 AC093166.4-201ENST00000457867 318 ntBASIC8.06□□□□□ -1.12
HLA-CQ95604 AC135721.2-201ENST00000464237 300 ntBASIC8.06□□□□□ -1.12
HLA-CQ95604 AC135999.1-201ENST00000478962 479 ntBASIC8.06□□□□□ -1.12
HLA-CQ95604 RN7SL849P-201ENST00000485236 295 ntBASIC8.06□□□□□ -1.12
HLA-CQ95604 CDH12P2-201ENST00000504393 298 ntBASIC8.06□□□□□ -1.12
HLA-CQ95604 AC139783.2-201ENST00000504847 1145 ntBASIC8.06□□□□□ -1.12
HLA-CQ95604 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC8.06□□□□□ -1.12
HLA-CQ95604 B4GALNT2P1-201ENST00000508857 307 ntBASIC8.06□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms