Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
TOPBP1Q92547 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC9.15□□□□□ -0.95
TOPBP1Q92547 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC9.15□□□□□ -0.95
TOPBP1Q92547 OR2AM1P-201ENST00000422137 422 ntBASIC9.15□□□□□ -0.95
TOPBP1Q92547 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC9.15□□□□□ -0.95
TOPBP1Q92547 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC9.15□□□□□ -0.95
TOPBP1Q92547 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC9.15□□□□□ -0.95
TOPBP1Q92547 AC009963.2-201ENST00000453431 138 ntBASIC9.15□□□□□ -0.95
TOPBP1Q92547 NDUFA5P9-201ENST00000472609 340 ntBASIC9.15□□□□□ -0.95
TOPBP1Q92547 RPS4XP20-201ENST00000505751 772 ntBASIC9.15□□□□□ -0.95
TOPBP1Q92547 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC9.15□□□□□ -0.95
TOPBP1Q92547 PMS2P3-207ENST00000529061 717 ntBASIC9.15□□□□□ -0.95
TOPBP1Q92547 OR5AN2P-201ENST00000534535 896 ntBASIC9.15□□□□□ -0.95
TOPBP1Q92547 AL163952.1-202ENST00000569625 600 ntBASIC9.15□□□□□ -0.95
TOPBP1Q92547 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC9.15□□□□□ -0.95
TOPBP1Q92547 AC073575.2-201ENST00000614212 627 ntBASIC9.15□□□□□ -0.95
TOPBP1Q92547 URB1-201ENST00000382751 10832 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
TOPBP1Q92547 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
TOPBP1Q92547 AL008638.3-201ENST00000623027 5182 ntBASIC9.15□□□□□ -0.95
TOPBP1Q92547 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
TOPBP1Q92547 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC9.14□□□□□ -0.95
TOPBP1Q92547 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
TOPBP1Q92547 CDH8-203ENST00000577390 9721 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
TOPBP1Q92547 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
TOPBP1Q92547 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
TOPBP1Q92547 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
TOPBP1Q92547 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC9.14□□□□□ -0.95
TOPBP1Q92547 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC9.14□□□□□ -0.95
TOPBP1Q92547 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC9.14□□□□□ -0.95
TOPBP1Q92547 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC9.14□□□□□ -0.95
TOPBP1Q92547 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC9.14□□□□□ -0.95
TOPBP1Q92547 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC9.14□□□□□ -0.95
TOPBP1Q92547 AL031320.1-201ENST00000604177 357 ntBASIC9.14□□□□□ -0.95
TOPBP1Q92547 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
TOPBP1Q92547 MIR6758-201ENST00000620653 63 ntBASIC9.14□□□□□ -0.95
TOPBP1Q92547 AC015660.5-201ENST00000623238 564 ntBASIC9.14□□□□□ -0.95
TOPBP1Q92547 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
TOPBP1Q92547 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
TOPBP1Q92547 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
TOPBP1Q92547 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
TOPBP1Q92547 FAM186A-204ENST00000543111 8200 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
TOPBP1Q92547 IRF5P1-201ENST00000504852 2164 ntBASIC9.14□□□□□ -0.95
TOPBP1Q92547 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
TOPBP1Q92547 MAPK10-304ENST00000641341 3984 ntBASIC9.13□□□□□ -0.95
TOPBP1Q92547 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC9.13□□□□□ -0.95
TOPBP1Q92547 GLRA2-201ENST00000218075 3216 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
TOPBP1Q92547 ONECUT2-202ENST00000491143 16121 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
TOPBP1Q92547 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC9.13□□□□□ -0.95
TOPBP1Q92547 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
TOPBP1Q92547 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
TOPBP1Q92547 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
TOPBP1Q92547 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
TOPBP1Q92547 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
TOPBP1Q92547 JPX-212ENST00000639185 9658 ntTSL 5 BASIC9.13□□□□□ -0.95
TOPBP1Q92547 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC9.13□□□□□ -0.95
TOPBP1Q92547 AL009179.1-201ENST00000406085 265 ntBASIC9.13□□□□□ -0.95
TOPBP1Q92547 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC9.13□□□□□ -0.95
TOPBP1Q92547 AC073264.2-201ENST00000448886 166 ntBASIC9.13□□□□□ -0.95
TOPBP1Q92547 AC104634.1-201ENST00000452720 462 ntBASIC9.13□□□□□ -0.95
TOPBP1Q92547 OSTCP1-201ENST00000455507 450 ntBASIC9.13□□□□□ -0.95
TOPBP1Q92547 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC9.13□□□□□ -0.95
TOPBP1Q92547 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC9.13□□□□□ -0.95
TOPBP1Q92547 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC9.13□□□□□ -0.95
TOPBP1Q92547 RN7SKP253-201ENST00000516424 309 ntBASIC9.13□□□□□ -0.95
TOPBP1Q92547 AP005403.1-201ENST00000579720 229 ntBASIC9.13□□□□□ -0.95
TOPBP1Q92547 AC104687.2-201ENST00000604442 342 ntBASIC9.13□□□□□ -0.95
TOPBP1Q92547 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
TOPBP1Q92547 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
TOPBP1Q92547 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
TOPBP1Q92547 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC9.13□□□□□ -0.95
TOPBP1Q92547 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
TOPBP1Q92547 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
TOPBP1Q92547 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
TOPBP1Q92547 PLEKHG4B-204ENST00000637938 12612 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
TOPBP1Q92547 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
TOPBP1Q92547 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
TOPBP1Q92547 CC2D2A-204ENST00000503292 5175 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
TOPBP1Q92547 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
TOPBP1Q92547 KAT6A-203ENST00000406337 9241 ntAPPRIS P3 TSL 5 BASIC9.12□□□□□ -0.95
TOPBP1Q92547 AL353626.3-201ENST00000413399 657 ntBASIC9.12□□□□□ -0.95
TOPBP1Q92547 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
TOPBP1Q92547 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC9.12□□□□□ -0.95
TOPBP1Q92547 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC9.12□□□□□ -0.95
TOPBP1Q92547 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC9.12□□□□□ -0.95
TOPBP1Q92547 AL161616.1-201ENST00000611867 286 ntBASIC9.12□□□□□ -0.95
TOPBP1Q92547 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
TOPBP1Q92547 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
TOPBP1Q92547 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
TOPBP1Q92547 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC9.12□□□□□ -0.95
TOPBP1Q92547 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC9.12□□□□□ -0.95
TOPBP1Q92547 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
TOPBP1Q92547 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC9.12□□□□□ -0.95
TOPBP1Q92547 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
TOPBP1Q92547 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
TOPBP1Q92547 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC9.12□□□□□ -0.95
TOPBP1Q92547 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
TOPBP1Q92547 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC9.12□□□□□ -0.95
TOPBP1Q92547 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
TOPBP1Q92547 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC9.12□□□□□ -0.95
TOPBP1Q92547 DOCK11P1-201ENST00000553480 5932 ntBASIC9.12□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms