Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC099676.1-201ENST00000608886 657 ntBASIC2.39□□□□□ -2.03
USH2AO75445 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC2.39□□□□□ -2.03
USH2AO75445 SPATA31B1P-201ENST00000434692 4016 ntBASIC2.39□□□□□ -2.03
USH2AO75445 LTBP1-204ENST00000407925 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
USH2AO75445 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC2.39□□□□□ -2.03
USH2AO75445 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
USH2AO75445 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC2.39□□□□□ -2.03
USH2AO75445 MUC3A-201ENST00000379458 11226 ntAPPRIS P2 TSL 5 BASIC2.39□□□□□ -2.03
USH2AO75445 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
USH2AO75445 PCDH15-233ENST00000621708 5700 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
USH2AO75445 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC2.39□□□□□ -2.03
USH2AO75445 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC2.39□□□□□ -2.03
USH2AO75445 NCAM2-202ENST00000400546 8135 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
USH2AO75445 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC2.39□□□□□ -2.03
USH2AO75445 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC2.39□□□□□ -2.03
USH2AO75445 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
USH2AO75445 AP003119.3-201ENST00000566747 4192 ntBASIC2.39□□□□□ -2.03
USH2AO75445 COL6A4P1-202ENST00000487147 4317 ntBASIC2.39□□□□□ -2.03
USH2AO75445 POLE-201ENST00000320574 7840 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
USH2AO75445 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC2.39□□□□□ -2.03
USH2AO75445 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC2.39□□□□□ -2.03
USH2AO75445 CEP63-202ENST00000337090 5632 ntAPPRIS P3 TSL 5 BASIC2.39□□□□□ -2.03
USH2AO75445 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
USH2AO75445 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
USH2AO75445 RN7SKP280-201ENST00000364196 304 ntBASIC2.39□□□□□ -2.03
USH2AO75445 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC2.39□□□□□ -2.03
USH2AO75445 REG1CP-206ENST00000447469 496 ntBASIC2.39□□□□□ -2.03
USH2AO75445 NPM1P27-201ENST00000502784 830 ntBASIC2.39□□□□□ -2.03
USH2AO75445 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC2.39□□□□□ -2.03
USH2AO75445 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
USH2AO75445 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
USH2AO75445 RSL1D1-204ENST00000571133 5483 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
USH2AO75445 NXPE3-205ENST00000491511 8074 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
USH2AO75445 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
USH2AO75445 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
USH2AO75445 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
USH2AO75445 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC2.39□□□□□ -2.03
USH2AO75445 ZNF605-202ENST00000360187 9340 ntAPPRIS P3 TSL 1 (best) BASIC2.39□□□□□ -2.03
USH2AO75445 ICA1L-222ENST00000617388 8151 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
USH2AO75445 UTY-205ENST00000382896 6661 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
USH2AO75445 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
USH2AO75445 EGFR-201ENST00000275493 9821 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
USH2AO75445 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC2.38□□□□□ -2.03
USH2AO75445 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC2.38□□□□□ -2.03
USH2AO75445 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
USH2AO75445 CYCSP19-201ENST00000411715 316 ntBASIC2.38□□□□□ -2.03
USH2AO75445 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
USH2AO75445 RPL23AP1-201ENST00000428990 471 ntBASIC2.38□□□□□ -2.03
USH2AO75445 CBX1P1-201ENST00000440184 427 ntBASIC2.38□□□□□ -2.03
USH2AO75445 AC095057.1-201ENST00000507583 168 ntBASIC2.38□□□□□ -2.03
USH2AO75445 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC2.38□□□□□ -2.03
USH2AO75445 MIR4311-201ENST00000580794 100 ntBASIC2.38□□□□□ -2.03
USH2AO75445 RALGAPB-203ENST00000397042 8652 ntAPPRIS ALT1 TSL 1 (best) BASIC2.38□□□□□ -2.03
USH2AO75445 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
USH2AO75445 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC2.38□□□□□ -2.03
USH2AO75445 PEG10-208ENST00000615790 6394 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
USH2AO75445 KIAA0319-206ENST00000616673 5315 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
USH2AO75445 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC2.38□□□□□ -2.03
USH2AO75445 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
USH2AO75445 ANO3-201ENST00000256737 6642 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
USH2AO75445 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
USH2AO75445 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
USH2AO75445 MYT1L-202ENST00000399161 7063 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
USH2AO75445 FLNB-201ENST00000295956 9463 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
USH2AO75445 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
USH2AO75445 BX284613.1-201ENST00000452221 1641 ntBASIC2.38□□□□□ -2.03
USH2AO75445 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
USH2AO75445 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
USH2AO75445 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
USH2AO75445 TRAV35-201ENST00000390462 330 ntBASIC2.38□□□□□ -2.03
USH2AO75445 MTCO1P54-201ENST00000430139 712 ntBASIC2.38□□□□□ -2.03
USH2AO75445 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC2.38□□□□□ -2.03
USH2AO75445 AC245028.2-201ENST00000458673 253 ntBASIC2.38□□□□□ -2.03
USH2AO75445 AC010326.1-201ENST00000462726 602 ntBASIC2.38□□□□□ -2.03
USH2AO75445 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC2.38□□□□□ -2.03
USH2AO75445 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC2.38□□□□□ -2.03
USH2AO75445 VN1R85P-201ENST00000601587 426 ntBASIC2.38□□□□□ -2.03
USH2AO75445 AC008739.3-201ENST00000603262 127 ntBASIC2.38□□□□□ -2.03
USH2AO75445 AL034374.2-201ENST00000605281 548 ntBASIC2.38□□□□□ -2.03
USH2AO75445 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC2.38□□□□□ -2.03
USH2AO75445 OR6C71P-202ENST00000641886 1107 ntBASIC2.38□□□□□ -2.03
USH2AO75445 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC2.38□□□□□ -2.03
USH2AO75445 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
USH2AO75445 RGMA-201ENST00000329082 11350 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
USH2AO75445 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC2.38□□□□□ -2.03
USH2AO75445 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC2.38□□□□□ -2.03
USH2AO75445 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
USH2AO75445 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC2.38□□□□□ -2.03
USH2AO75445 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
USH2AO75445 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC2.38□□□□□ -2.03
USH2AO75445 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
USH2AO75445 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
USH2AO75445 TMCC1-201ENST00000393238 5992 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
USH2AO75445 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC2.38□□□□□ -2.03
USH2AO75445 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC2.38□□□□□ -2.03
USH2AO75445 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC2.38□□□□□ -2.03
USH2AO75445 SIPA1L2-201ENST00000262861 6555 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
USH2AO75445 RNU4-25P-201ENST00000410569 230 ntBASIC2.38□□□□□ -2.03
USH2AO75445 CHEK2P3-201ENST00000416118 248 ntBASIC2.38□□□□□ -2.03
USH2AO75445 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms