Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 LINC01994-201ENST00000496220 1808 ntTSL 2 BASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 OXCT1-204ENST00000509987 1441 ntTSL 2 BASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 MTND5P1-201ENST00000445440 1375 ntBASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 AL162171.3-201ENST00000617439 3178 ntBASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 SERPINB13-202ENST00000344731 3114 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 AC132219.2-201ENST00000624416 2327 ntBASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 RNU6-152P-201ENST00000384037 107 ntBASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 AL139039.2-201ENST00000407436 479 ntBASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 SNORA3.1-201ENST00000408166 111 ntBASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 SNORA11.3-201ENST00000408471 128 ntBASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 ZBTB8OSP2-201ENST00000423890 504 ntBASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 MTND4P24-201ENST00000424002 397 ntBASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 AC093422.3-201ENST00000428506 305 ntBASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 RPL3P11-201ENST00000434028 1146 ntBASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 ARAFP2-201ENST00000440565 559 ntBASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 SPRYD7P1-201ENST00000443861 570 ntBASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 AC040975.1-201ENST00000472104 316 ntBASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 AC091982.1-202ENST00000473923 343 ntBASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 AC112518.2-201ENST00000508565 425 ntBASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 OR4A1P-201ENST00000532342 920 ntBASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 PDCL2P2-201ENST00000533651 189 ntBASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 ASB8-207ENST00000536953 923 ntTSL 2 BASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 AC011611.5-201ENST00000552477 578 ntBASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 PSMA3P-201ENST00000555485 635 ntBASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 EIF4A2P1-201ENST00000587313 1063 ntBASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 AC019257.2-201ENST00000605539 497 ntBASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 SNORA11.6-201ENST00000619030 128 ntBASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 AC004836.1-201ENST00000623032 634 ntBASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
PDZRN3Q9UPQ7 AL359263.1-201ENST00000441188 2796 ntBASIC9.12□□□□□ -0.95
PDZRN3Q9UPQ7 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
PDZRN3Q9UPQ7 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC9.12□□□□□ -0.95
PDZRN3Q9UPQ7 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
PDZRN3Q9UPQ7 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC9.12□□□□□ -0.95
PDZRN3Q9UPQ7 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC9.12□□□□□ -0.95
PDZRN3Q9UPQ7 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
PDZRN3Q9UPQ7 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
PDZRN3Q9UPQ7 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
PDZRN3Q9UPQ7 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
PDZRN3Q9UPQ7 SNORA70.5-201ENST00000365519 135 ntBASIC9.12□□□□□ -0.95
PDZRN3Q9UPQ7 RN7SKP187-201ENST00000365536 330 ntBASIC9.12□□□□□ -0.95
PDZRN3Q9UPQ7 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
PDZRN3Q9UPQ7 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
PDZRN3Q9UPQ7 SNORD94-201ENST00000386037 137 ntBASIC9.12□□□□□ -0.95
PDZRN3Q9UPQ7 MT-TH-201ENST00000387441 69 ntBASIC9.12□□□□□ -0.95
PDZRN3Q9UPQ7 SNORD115-47-201ENST00000391226 86 ntBASIC9.12□□□□□ -0.95
PDZRN3Q9UPQ7 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC9.12□□□□□ -0.95
PDZRN3Q9UPQ7 DNAJA1P3-201ENST00000399417 1194 ntBASIC9.12□□□□□ -0.95
PDZRN3Q9UPQ7 AL136310.1-201ENST00000404926 654 ntBASIC9.12□□□□□ -0.95
PDZRN3Q9UPQ7 MTCO3P31-201ENST00000405526 789 ntBASIC9.12□□□□□ -0.95
PDZRN3Q9UPQ7 AL603908.1-201ENST00000406098 201 ntBASIC9.12□□□□□ -0.95
PDZRN3Q9UPQ7 AL136100.1-201ENST00000407696 330 ntBASIC9.12□□□□□ -0.95
PDZRN3Q9UPQ7 RNA5SP280-201ENST00000411230 115 ntBASIC9.12□□□□□ -0.95
PDZRN3Q9UPQ7 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC9.12□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms