RNA–Protein interactions for RNA: ENST00000428506.1

AC093422.3-201, humanhuman

BASIC

Gene AC093422.3, Length 305 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC093422.3-201ENST00000428506 AEBP2Q6ZN18 517 aaPredicted RBP23.58■■□□□ 1.37
AC093422.3-201ENST00000428506 CHIC1Q5VXU3 224 aa23.37■■□□□ 1.33
AC093422.3-201ENST00000428506 PHF23Q9BUL5 403 aaPredicted RBP20.5■□□□□ 0.87
AC093422.3-201ENST00000428506 SENP3Q9H4L4 574 aaPredicted RBP20.09■□□□□ 0.81
AC093422.3-201ENST00000428506 PLPPR3Q6T4P5 718 aa19.11■□□□□ 0.65
AC093422.3-201ENST00000428506 FOXD1Q16676 465 aa18.52■□□□□ 0.56
AC093422.3-201ENST00000428506 PPP6R1Q9UPN7 881 aa17.97■□□□□ 0.47
AC093422.3-201ENST00000428506 ADRA2BP18089 450 aa17.95■□□□□ 0.46
AC093422.3-201ENST00000428506 PIAS4Q8N2W9 510 aaPredicted RBP17.53■□□□□ 0.4
AC093422.3-201ENST00000428506 MSH5O43196 834 aa17.09■□□□□ 0.33
AC093422.3-201ENST00000428506 PPP4R3CPQ6ZMV5 832 aa16.81■□□□□ 0.28
AC093422.3-201ENST00000428506 KCNA4P22459 653 aa16.66■□□□□ 0.26
AC093422.3-201ENST00000428506 SCAF1Q9H7N4 1312 aaKnown RBP16.57■□□□□ 0.24
AC093422.3-201ENST00000428506 NCBP3Q53F19 620 aaKnown RBP16.51■□□□□ 0.23
AC093422.3-201ENST00000428506 CNKSR2Q8WXI2 1034 aa16.34■□□□□ 0.21
AC093422.3-201ENST00000428506 NPM3O75607 178 aaKnown RBP16.2■□□□□ 0.18
AC093422.3-201ENST00000428506 MAPK8IP2Q13387 824 aaPredicted RBP16.19■□□□□ 0.18
AC093422.3-201ENST00000428506 DMRT2Q9Y5R5 561 aa16.06■□□□□ 0.16
AC093422.3-201ENST00000428506 RNF216Q9NWF9 866 aaPredicted RBP15.97■□□□□ 0.15
AC093422.3-201ENST00000428506 SLC4A1APQ9BWU0 796 aaKnown RBP15.94■□□□□ 0.14
AC093422.3-201ENST00000428506 DNAJC5BQ9UF47 199 aa15.89■□□□□ 0.13
AC093422.3-201ENST00000428506 HOXD11P31277 338 aaPredicted RBP15.85■□□□□ 0.13
AC093422.3-201ENST00000428506 EHMT2Q96KQ7 1210 aa15.68■□□□□ 0.1
AC093422.3-201ENST00000428506 CSRNP3Q8WYN3 585 aa15.46■□□□□ 0.07
AC093422.3-201ENST00000428506 FOXD4L1Q9NU39 408 aa15.35■□□□□ 0.05
AC093422.3-201ENST00000428506 ZBTB22O15209 634 aa15.32■□□□□ 0.04
AC093422.3-201ENST00000428506 SLC4A2P04920 1241 aa15.23■□□□□ 0.03
AC093422.3-201ENST00000428506 DCAF8L1A6NGE4 600 aa15.21■□□□□ 0.03
AC093422.3-201ENST00000428506 MYCNP04198 464 aaPredicted RBP15.03■□□□□ -0
AC093422.3-201ENST00000428506 POTEDQ86YR6 584 aa15.03■□□□□ -0
AC093422.3-201ENST00000428506 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.02■□□□□ -0
AC093422.3-201ENST00000428506 ATXN8OSP0DMR3 200 aa14.85□□□□□ -0.03
AC093422.3-201ENST00000428506 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.83□□□□□ -0.04
AC093422.3-201ENST00000428506 HNRNPUL2Q1KMD3 747 aaKnown RBP14.83□□□□□ -0.04
AC093422.3-201ENST00000428506 U3KPZ7 1027 aaPredicted RBP14.83□□□□□ -0.04
AC093422.3-201ENST00000428506 SAMD1Q6SPF0 538 aaPredicted RBP14.76□□□□□ -0.05
AC093422.3-201ENST00000428506 APLP2Q06481 763 aa14.63□□□□□ -0.07
AC093422.3-201ENST00000428506 RNF39Q9H2S5 420 aa14.62□□□□□ -0.07
AC093422.3-201ENST00000428506 C1QBPQ07021 282 aaKnown RBP14.51□□□□□ -0.09
AC093422.3-201ENST00000428506 ATF5Q9Y2D1 282 aaPredicted RBP14.47□□□□□ -0.09
AC093422.3-201ENST00000428506 ZNF219Q9P2Y4 722 aaPredicted RBP14.33□□□□□ -0.12
AC093422.3-201ENST00000428506 SPINK5Q9NQ38 1064 aaPredicted RBP14.28□□□□□ -0.12
AC093422.3-201ENST00000428506 CAPN15O75808 1086 aa14.22□□□□□ -0.13
AC093422.3-201ENST00000428506 TRHP20396 242 aaPredicted RBP14.19□□□□□ -0.14
AC093422.3-201ENST00000428506 POLA2Q14181 598 aa14.05□□□□□ -0.16
AC093422.3-201ENST00000428506 CACNB1Q02641 598 aaPredicted RBP14□□□□□ -0.17
AC093422.3-201ENST00000428506 DSG3P32926 999 aa13.98□□□□□ -0.17
AC093422.3-201ENST00000428506 ZBTB12Q9Y330 459 aaPredicted RBP13.98□□□□□ -0.17
AC093422.3-201ENST00000428506 FBLN2P98095 1184 aa13.96□□□□□ -0.17
AC093422.3-201ENST00000428506 FKBP8Q14318 412 aa13.95□□□□□ -0.18
AC093422.3-201ENST00000428506 ABCB7O75027 752 aa13.93□□□□□ -0.18
AC093422.3-201ENST00000428506 MKRN4PQ13434 485 aaPredicted RBP13.91□□□□□ -0.18
AC093422.3-201ENST00000428506 SPDYE4A6NLX3 237 aa13.73□□□□□ -0.21
AC093422.3-201ENST00000428506 PROM2Q8N271 834 aa13.64□□□□□ -0.23
AC093422.3-201ENST00000428506 SPDYE2BA6NHP3 402 aa13.59□□□□□ -0.23
AC093422.3-201ENST00000428506 SPDYE6P0CI01 402 aa13.59□□□□□ -0.23
AC093422.3-201ENST00000428506 SPDYE2Q495Y8 402 aa13.59□□□□□ -0.23
AC093422.3-201ENST00000428506 OSCARQ8IYS5 282 aa13.57□□□□□ -0.24
AC093422.3-201ENST00000428506 FBXO3Q9UK99 471 aa13.5□□□□□ -0.25
AC093422.3-201ENST00000428506 SSUH2Q9Y2M2 353 aa13.5□□□□□ -0.25
AC093422.3-201ENST00000428506 ZNF692Q9BU19 519 aaPredicted RBP13.49□□□□□ -0.25
AC093422.3-201ENST00000428506 RBM42Q9BTD8 480 aaKnown RBP13.4□□□□□ -0.26
AC093422.3-201ENST00000428506 PABPN1Q86U42 306 aaKnown RBP eCLIP13.31□□□□□ -0.28
AC093422.3-201ENST00000428506 AKT1S1Q96B36 256 aa13.26□□□□□ -0.29
AC093422.3-201ENST00000428506 VASPP50552 380 aaPredicted RBP13.25□□□□□ -0.29
AC093422.3-201ENST00000428506 STAG3Q9UJ98 1225 aa13.25□□□□□ -0.29
AC093422.3-201ENST00000428506 AMER1Q5JTC6 1135 aaPredicted RBP13.24□□□□□ -0.29
AC093422.3-201ENST00000428506 SPDYE1Q8NFV5 336 aaPredicted RBP13.11□□□□□ -0.31
AC093422.3-201ENST00000428506 RTN4Q9NQC3 1192 aaKnown RBP13.09□□□□□ -0.31
AC093422.3-201ENST00000428506 REM2Q8IYK8 340 aaPredicted RBP13.07□□□□□ -0.32
AC093422.3-201ENST00000428506 IFNLR1Q8IU57 520 aaPredicted RBP13.05□□□□□ -0.32
AC093422.3-201ENST00000428506 PLCD3Q8N3E9 789 aa12.98□□□□□ -0.33
AC093422.3-201ENST00000428506 PLEKHG5O94827 1062 aa12.97□□□□□ -0.33
AC093422.3-201ENST00000428506 MIER1Q8N108 512 aa12.96□□□□□ -0.33
AC093422.3-201ENST00000428506 ZBTB47Q9UFB7 747 aaPredicted RBP12.95□□□□□ -0.34
AC093422.3-201ENST00000428506 CLEC11AQ9Y240 323 aa12.92□□□□□ -0.34
AC093422.3-201ENST00000428506 PITPNM1O00562 1244 aa12.9□□□□□ -0.34
AC093422.3-201ENST00000428506 PRR29P0C7W0 189 aa12.9□□□□□ -0.34
AC093422.3-201ENST00000428506 KLHL34Q8N239 644 aa12.9□□□□□ -0.34
AC093422.3-201ENST00000428506 SPOCK2Q92563 424 aa12.89□□□□□ -0.35
AC093422.3-201ENST00000428506 CREBZFQ9NS37 354 aa12.8□□□□□ -0.36
AC093422.3-201ENST00000428506 MNX1P50219 401 aaPredicted RBP12.72□□□□□ -0.37
AC093422.3-201ENST00000428506 PKD2Q13563 968 aa12.72□□□□□ -0.37
AC093422.3-201ENST00000428506 FXR2P51116 673 aaKnown RBP eCLIP12.66□□□□□ -0.38
AC093422.3-201ENST00000428506 CHRDL2Q6WN34 429 aa12.66□□□□□ -0.38
AC093422.3-201ENST00000428506 NPM1P06748 294 aaKnown RBP eCLIP12.65□□□□□ -0.38
AC093422.3-201ENST00000428506 NUBP1P53384 320 aa12.65□□□□□ -0.38
AC093422.3-201ENST00000428506 TRIM41Q8WV44 630 aa12.64□□□□□ -0.39
AC093422.3-201ENST00000428506 GSE1Q14687 1217 aa12.63□□□□□ -0.39
AC093422.3-201ENST00000428506 ECM2O94769 699 aaPredicted RBP12.58□□□□□ -0.4
AC093422.3-201ENST00000428506 PRKAR2AP13861 404 aaKnown RBP12.57□□□□□ -0.4
AC093422.3-201ENST00000428506 FAM212AQ96EL1 285 aa12.57□□□□□ -0.4
AC093422.3-201ENST00000428506 CIZ1Q9ULV3 898 aaPredicted RBP12.57□□□□□ -0.4
AC093422.3-201ENST00000428506 CHADLQ6NUI6 762 aa12.56□□□□□ -0.4
AC093422.3-201ENST00000428506 FARP1Q9Y4F1 1045 aaPredicted RBP12.56□□□□□ -0.4
AC093422.3-201ENST00000428506 PIP4P2Q8N4L2 257 aa12.53□□□□□ -0.4
AC093422.3-201ENST00000428506 RASEFQ8IZ41 740 aa12.51□□□□□ -0.41
AC093422.3-201ENST00000428506 DCAF8Q5TAQ9 597 aa12.49□□□□□ -0.41
AC093422.3-201ENST00000428506 CHRM1P11229 460 aaPredicted RBP12.45□□□□□ -0.42
AC093422.3-201ENST00000428506 RGL2O15211 777 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms