Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 AL445250.1-203ENST00000641829 1535 ntBASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 PDIK1L-202ENST00000374271 4279 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 PTPN14-205ENST00000543945 3842 ntTSL 5 BASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 LIMCH1-219ENST00000514096 3543 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 FOPNL-206ENST00000573968 2039 ntTSL 2 BASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 TBX5-AS1-201ENST00000528549 3620 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 CXCR4-202ENST00000409817 1895 ntAPPRIS P3 BASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 AL669831.5-218ENST00000591702 1873 ntBASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 TRIM16-212ENST00000578237 3206 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 GLS2-215ENST00000539272 2174 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 PALM2-AKAP2-201ENST00000302798 4718 ntTSL 2 BASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 SYF2-202ENST00000354361 926 ntTSL 2 BASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 RNA5SP463-201ENST00000363030 120 ntBASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 Y_RNA.216-201ENST00000364205 93 ntBASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 C6orf48-201ENST00000375633 586 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 SMIM2-201ENST00000400419 822 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 AKR1B15-201ENST00000423958 1035 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 AL121776.1-201ENST00000429337 372 ntBASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 AC096632.2-201ENST00000438139 1239 ntBASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 AL512286.1-201ENST00000439244 400 ntBASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 HMGB3P9-201ENST00000441799 583 ntBASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 PA2G4P1-201ENST00000442248 1197 ntBASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 OR7E125P-201ENST00000443450 846 ntBASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 SPRYD7P1-201ENST00000443861 570 ntBASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 SEPHS1P4-201ENST00000446112 1176 ntBASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 RPS3AP49-201ENST00000472161 790 ntBASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 AP002884.1-201ENST00000479691 655 ntBASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 DUBR-205ENST00000495228 411 ntTSL 2 BASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 AC111000.3-201ENST00000508057 576 ntBASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 IGHV3-63-201ENST00000518422 341 ntBASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 KRT73-AS1-203ENST00000552364 3808 ntTSL 2 BASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 APEX1-214ENST00000557054 888 ntTSL 5 BASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 LINC01515-209ENST00000599409 755 ntTSL 5 BASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 MIR6774-201ENST00000614651 70 ntBASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 AL109954.1-201ENST00000619495 557 ntTSL 4 BASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 AL359880.1-201ENST00000621879 266 ntBASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 AC012557.3-201ENST00000626439 255 ntBASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 AL121936.2-201ENST00000641935 662 ntBASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 FSTL5-203ENST00000427802 2920 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 MTCO1P11-201ENST00000429111 1528 ntBASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 C14orf37-201ENST00000267485 6495 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 AC092821.3-202ENST00000641304 2767 ntBASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 EEF1A1P3-201ENST00000417549 1385 ntBASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 ZNF577-201ENST00000301399 3074 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 AC023818.2-201ENST00000623817 2304 ntBASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 PTBP3-204ENST00000374255 3413 ntAPPRIS P3 TSL 5 BASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 SOX6-211ENST00000528429 2656 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 DAZ2-208ENST00000400493 3516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
CUEDC1Q9NWM3 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 AC116351.1-201ENST00000399869 3482 ntTSL 2 BASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 FAF2-201ENST00000261942 4515 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 AP005901.5-201ENST00000545779 1796 ntBASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 TMC1-202ENST00000340019 3068 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 MAPK10-313ENST00000641405 2469 ntBASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 RBBP5-201ENST00000264515 4404 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 AC027097.2-201ENST00000588925 1976 ntTSL 2 BASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 PPIAP26-201ENST00000377951 522 ntBASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 AMELY-202ENST00000383036 621 ntTSL 5 BASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 RNA5SP185-201ENST00000390963 114 ntBASIC7.54□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 499.7 ms