Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC7.27□□□□□ -1.25
ABCA3Q99758 AL121722.1-201ENST00000638550 4849 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
ABCA3Q99758 SNORD56.6-201ENST00000384569 71 ntBASIC7.27□□□□□ -1.25
ABCA3Q99758 NPM1P40-201ENST00000412758 733 ntBASIC7.27□□□□□ -1.25
ABCA3Q99758 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC7.27□□□□□ -1.25
ABCA3Q99758 USP9YP9-201ENST00000429406 715 ntBASIC7.27□□□□□ -1.25
ABCA3Q99758 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC7.27□□□□□ -1.25
ABCA3Q99758 MEMO1P4-201ENST00000453590 386 ntBASIC7.27□□□□□ -1.25
ABCA3Q99758 AL356981.1-201ENST00000454879 684 ntBASIC7.27□□□□□ -1.25
ABCA3Q99758 RN7SL817P-201ENST00000480777 288 ntBASIC7.27□□□□□ -1.25
ABCA3Q99758 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC7.27□□□□□ -1.25
ABCA3Q99758 GTF2F2P1-201ENST00000511083 675 ntBASIC7.27□□□□□ -1.25
ABCA3Q99758 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC7.27□□□□□ -1.25
ABCA3Q99758 AC020910.2-201ENST00000603635 610 ntBASIC7.27□□□□□ -1.25
ABCA3Q99758 AP005432.2-201ENST00000608162 586 ntBASIC7.27□□□□□ -1.25
ABCA3Q99758 AC068831.8-201ENST00000620171 435 ntBASIC7.27□□□□□ -1.25
ABCA3Q99758 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
ABCA3Q99758 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
ABCA3Q99758 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
ABCA3Q99758 AC092747.4-201ENST00000620519 1861 ntBASIC7.26□□□□□ -1.25
ABCA3Q99758 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC7.26□□□□□ -1.25
ABCA3Q99758 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
ABCA3Q99758 GTF2A1-203ENST00000553612 6306 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
ABCA3Q99758 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
ABCA3Q99758 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
ABCA3Q99758 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC7.26□□□□□ -1.25
ABCA3Q99758 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
ABCA3Q99758 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
ABCA3Q99758 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
ABCA3Q99758 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
ABCA3Q99758 AL078621.3-201ENST00000623707 2042 ntBASIC7.26□□□□□ -1.25
ABCA3Q99758 AURKA-208ENST00000395915 2114 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
ABCA3Q99758 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
ABCA3Q99758 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC7.26□□□□□ -1.25
ABCA3Q99758 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC7.26□□□□□ -1.25
ABCA3Q99758 SCARNA16.4-201ENST00000516956 187 ntBASIC7.26□□□□□ -1.25
ABCA3Q99758 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC7.26□□□□□ -1.25
ABCA3Q99758 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC7.26□□□□□ -1.25
ABCA3Q99758 AC015660.5-201ENST00000623238 564 ntBASIC7.26□□□□□ -1.25
ABCA3Q99758 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
ABCA3Q99758 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC7.26□□□□□ -1.25
ABCA3Q99758 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
ABCA3Q99758 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC7.26□□□□□ -1.25
ABCA3Q99758 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
ABCA3Q99758 DOCK11P1-201ENST00000553480 5932 ntBASIC7.26□□□□□ -1.25
ABCA3Q99758 ONECUT2-202ENST00000491143 16121 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
ABCA3Q99758 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC7.26□□□□□ -1.25
ABCA3Q99758 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
ABCA3Q99758 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
ABCA3Q99758 GPR161-201ENST00000271357 7806 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
ABCA3Q99758 DPY19L3-205ENST00000586987 5925 ntTSL 5 BASIC7.25□□□□□ -1.25
ABCA3Q99758 SCUBE3-201ENST00000274938 7356 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
ABCA3Q99758 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
ABCA3Q99758 TP53BP1-203ENST00000382044 10384 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
ABCA3Q99758 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
ABCA3Q99758 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
ABCA3Q99758 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
ABCA3Q99758 AC006511.3-201ENST00000624929 1783 ntBASIC7.25□□□□□ -1.25
ABCA3Q99758 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
ABCA3Q99758 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
ABCA3Q99758 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
ABCA3Q99758 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
ABCA3Q99758 AP004607.3-201ENST00000530354 3915 ntBASIC7.25□□□□□ -1.25
ABCA3Q99758 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC7.25□□□□□ -1.25
ABCA3Q99758 NDUFA5P9-201ENST00000472609 340 ntBASIC7.25□□□□□ -1.25
ABCA3Q99758 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
ABCA3Q99758 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC7.25□□□□□ -1.25
ABCA3Q99758 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
ABCA3Q99758 RN7SL356P-201ENST00000582228 248 ntBASIC7.25□□□□□ -1.25
ABCA3Q99758 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC7.25□□□□□ -1.25
ABCA3Q99758 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC7.25□□□□□ -1.25
ABCA3Q99758 AC073575.2-201ENST00000614212 627 ntBASIC7.25□□□□□ -1.25
ABCA3Q99758 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
ABCA3Q99758 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
ABCA3Q99758 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
ABCA3Q99758 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
ABCA3Q99758 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC7.25□□□□□ -1.25
ABCA3Q99758 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
ABCA3Q99758 IL22RA2-203ENST00000349184 2801 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
ABCA3Q99758 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
ABCA3Q99758 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
ABCA3Q99758 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
ABCA3Q99758 URB1-201ENST00000382751 10832 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
ABCA3Q99758 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
ABCA3Q99758 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC7.25□□□□□ -1.25
ABCA3Q99758 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
ABCA3Q99758 MYOF-201ENST00000358334 6680 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
ABCA3Q99758 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
ABCA3Q99758 RNA5SP455-201ENST00000365190 119 ntBASIC7.24□□□□□ -1.25
ABCA3Q99758 RNU6-398P-201ENST00000384143 109 ntBASIC7.24□□□□□ -1.25
ABCA3Q99758 AL356967.1-201ENST00000406305 431 ntBASIC7.24□□□□□ -1.25
ABCA3Q99758 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
ABCA3Q99758 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC7.24□□□□□ -1.25
ABCA3Q99758 AC104634.1-201ENST00000452720 462 ntBASIC7.24□□□□□ -1.25
ABCA3Q99758 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
ABCA3Q99758 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC7.24□□□□□ -1.25
ABCA3Q99758 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC7.24□□□□□ -1.25
ABCA3Q99758 OR5AN2P-201ENST00000534535 896 ntBASIC7.24□□□□□ -1.25
ABCA3Q99758 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
ABCA3Q99758 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms