Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SRP9P49458 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SRP9P49458 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SRP9P49458 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SRP9P49458 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SRP9P49458 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
SRP9P49458 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SRP9P49458 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
SRP9P49458 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.1□□□□□ -1.59
SRP9P49458 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SRP9P49458 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SRP9P49458 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
SRP9P49458 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SRP9P49458 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5.1□□□□□ -1.59
SRP9P49458 MIR130B-202ENST00000385018 82 ntBASIC5.1□□□□□ -1.59
SRP9P49458 IFIT1P1-201ENST00000400497 1449 ntBASIC5.1□□□□□ -1.59
SRP9P49458 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.1□□□□□ -1.59
SRP9P49458 CRIP1P1-201ENST00000427567 185 ntBASIC5.1□□□□□ -1.59
SRP9P49458 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.1□□□□□ -1.59
SRP9P49458 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.1□□□□□ -1.59
SRP9P49458 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
SRP9P49458 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.1□□□□□ -1.59
SRP9P49458 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.1□□□□□ -1.59
SRP9P49458 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.1□□□□□ -1.59
SRP9P49458 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.1□□□□□ -1.59
SRP9P49458 HSPD1P7-201ENST00000447985 1686 ntBASIC5.1□□□□□ -1.59
SRP9P49458 AL354854.1-201ENST00000455940 1363 ntBASIC5.1□□□□□ -1.59
SRP9P49458 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
SRP9P49458 AC104164.1-201ENST00000460282 590 ntBASIC5.1□□□□□ -1.59
SRP9P49458 AC023245.1-201ENST00000468501 517 ntBASIC5.1□□□□□ -1.59
SRP9P49458 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.1□□□□□ -1.59
SRP9P49458 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.1□□□□□ -1.59
SRP9P49458 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.1□□□□□ -1.59
SRP9P49458 SETP21-201ENST00000514799 892 ntBASIC5.1□□□□□ -1.59
SRP9P49458 RN7SKP238-201ENST00000516483 249 ntBASIC5.1□□□□□ -1.59
SRP9P49458 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.1□□□□□ -1.59
SRP9P49458 WBP1LP3-201ENST00000523033 208 ntBASIC5.1□□□□□ -1.59
SRP9P49458 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.1□□□□□ -1.59
SRP9P49458 OR4A43P-201ENST00000532938 908 ntBASIC5.1□□□□□ -1.59
SRP9P49458 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.1□□□□□ -1.59
SRP9P49458 CYCSP38-201ENST00000559840 322 ntBASIC5.1□□□□□ -1.59
SRP9P49458 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.1□□□□□ -1.59
SRP9P49458 AC005244.1-201ENST00000582566 339 ntBASIC5.1□□□□□ -1.59
SRP9P49458 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.1□□□□□ -1.59
SRP9P49458 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.1□□□□□ -1.59
SRP9P49458 AC010503.3-201ENST00000594355 540 ntBASIC5.1□□□□□ -1.59
SRP9P49458 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.1□□□□□ -1.59
SRP9P49458 AC079315.1-201ENST00000602952 623 ntBASIC5.1□□□□□ -1.59
SRP9P49458 AL353729.2-201ENST00000605859 1249 ntBASIC5.1□□□□□ -1.59
SRP9P49458 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.1□□□□□ -1.59
SRP9P49458 AC104964.3-201ENST00000606115 2860 ntBASIC5.1□□□□□ -1.59
SRP9P49458 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.1□□□□□ -1.59
SRP9P49458 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.1□□□□□ -1.59
SRP9P49458 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.1□□□□□ -1.59
SRP9P49458 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.1□□□□□ -1.59
SRP9P49458 AL357562.1-201ENST00000624911 609 ntBASIC5.1□□□□□ -1.59
SRP9P49458 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.1□□□□□ -1.59
SRP9P49458 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.1□□□□□ -1.59
SRP9P49458 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
SRP9P49458 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SRP9P49458 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SRP9P49458 AP005432.1-201ENST00000580891 3485 ntBASIC5.1□□□□□ -1.59
SRP9P49458 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
SRP9P49458 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
SRP9P49458 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.1□□□□□ -1.59
SRP9P49458 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
SRP9P49458 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SRP9P49458 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.09□□□□□ -1.59
SRP9P49458 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.09□□□□□ -1.59
SRP9P49458 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SRP9P49458 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
SRP9P49458 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.09□□□□□ -1.59
SRP9P49458 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.09□□□□□ -1.59
SRP9P49458 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SRP9P49458 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.09□□□□□ -1.59
SRP9P49458 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SRP9P49458 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SRP9P49458 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.59
SRP9P49458 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.09□□□□□ -1.59
SRP9P49458 AC004386.1-201ENST00000393214 761 ntBASIC5.09□□□□□ -1.59
SRP9P49458 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
SRP9P49458 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.09□□□□□ -1.59
SRP9P49458 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.09□□□□□ -1.59
SRP9P49458 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SRP9P49458 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SRP9P49458 SDC4P-201ENST00000453285 601 ntBASIC5.09□□□□□ -1.59
SRP9P49458 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.09□□□□□ -1.59
SRP9P49458 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.09□□□□□ -1.59
SRP9P49458 RPS4XP12-201ENST00000461747 709 ntBASIC5.09□□□□□ -1.59
SRP9P49458 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SRP9P49458 RPL5P22-201ENST00000480199 884 ntBASIC5.09□□□□□ -1.59
SRP9P49458 LDHAP1-201ENST00000509421 992 ntBASIC5.09□□□□□ -1.59
SRP9P49458 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.09□□□□□ -1.59
SRP9P49458 SCARNA18.1-201ENST00000516330 83 ntBASIC5.09□□□□□ -1.59
SRP9P49458 IGKV3D-25-201ENST00000519599 235 ntBASIC5.09□□□□□ -1.59
SRP9P49458 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.09□□□□□ -1.59
SRP9P49458 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.09□□□□□ -1.59
SRP9P49458 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC5.09□□□□□ -1.59
SRP9P49458 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.09□□□□□ -1.59
SRP9P49458 AL022394.1-201ENST00000606979 292 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms