Protein–RNA interactions for Protein: P28827

PTPRM, Receptor-type tyrosine-protein phosphatase mu, humanhuman

Predictions only

Length 1,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRMP28827 AC093799.2-201ENST00000610062 578 ntBASIC8.19□□□□□ -1.1
PTPRMP28827 AC068724.3-201ENST00000625906 87 ntBASIC8.19□□□□□ -1.1
PTPRMP28827 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC8.19□□□□□ -1.1
PTPRMP28827 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC8.19□□□□□ -1.1
PTPRMP28827 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
PTPRMP28827 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC8.19□□□□□ -1.1
PTPRMP28827 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
PTPRMP28827 KLC1-204ENST00000348520 15091 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
PTPRMP28827 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC8.19□□□□□ -1.1
PTPRMP28827 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
PTPRMP28827 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
PTPRMP28827 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
PTPRMP28827 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
PTPRMP28827 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
PTPRMP28827 AL078599.1-201ENST00000402075 293 ntBASIC8.19□□□□□ -1.1
PTPRMP28827 AC004690.1-201ENST00000418216 328 ntBASIC8.19□□□□□ -1.1
PTPRMP28827 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC8.19□□□□□ -1.1
PTPRMP28827 AC004975.1-201ENST00000428733 208 ntBASIC8.19□□□□□ -1.1
PTPRMP28827 CCDC11P1-201ENST00000503137 1162 ntBASIC8.19□□□□□ -1.1
PTPRMP28827 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC8.19□□□□□ -1.1
PTPRMP28827 AP002981.1-201ENST00000517692 975 ntBASIC8.19□□□□□ -1.1
PTPRMP28827 MAL2-207ENST00000522828 603 ntTSL 3 BASIC8.19□□□□□ -1.1
PTPRMP28827 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC8.19□□□□□ -1.1
PTPRMP28827 AC126615.2-201ENST00000553003 515 ntBASIC8.19□□□□□ -1.1
PTPRMP28827 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC8.19□□□□□ -1.1
PTPRMP28827 AC004890.3-201ENST00000605566 1095 ntBASIC8.19□□□□□ -1.1
PTPRMP28827 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC8.19□□□□□ -1.1
PTPRMP28827 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC8.19□□□□□ -1.1
PTPRMP28827 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
PTPRMP28827 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC8.18□□□□□ -1.1
PTPRMP28827 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PTPRMP28827 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
PTPRMP28827 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC8.18□□□□□ -1.1
PTPRMP28827 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC8.18□□□□□ -1.1
PTPRMP28827 AC010401.2-201ENST00000575137 4934 ntBASIC8.18□□□□□ -1.1
PTPRMP28827 SCN8A-203ENST00000545061 11433 ntTSL 5 BASIC8.18□□□□□ -1.1
PTPRMP28827 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PTPRMP28827 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
PTPRMP28827 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
PTPRMP28827 AC005225.5-201ENST00000623547 2225 ntBASIC8.18□□□□□ -1.1
PTPRMP28827 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
PTPRMP28827 RNA5SP388-201ENST00000362584 119 ntBASIC8.18□□□□□ -1.1
PTPRMP28827 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC8.18□□□□□ -1.1
PTPRMP28827 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
PTPRMP28827 MIR130A-201ENST00000385274 89 ntBASIC8.18□□□□□ -1.1
PTPRMP28827 RPL17P50-201ENST00000396131 546 ntBASIC8.18□□□□□ -1.1
PTPRMP28827 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC8.18□□□□□ -1.1
PTPRMP28827 AL162739.1-201ENST00000450606 307 ntBASIC8.18□□□□□ -1.1
PTPRMP28827 RN7SL41P-201ENST00000476144 297 ntBASIC8.18□□□□□ -1.1
PTPRMP28827 RPL23AP40-201ENST00000487630 390 ntBASIC8.18□□□□□ -1.1
PTPRMP28827 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC8.18□□□□□ -1.1
PTPRMP28827 AC233699.1-201ENST00000569955 1168 ntBASIC8.18□□□□□ -1.1
PTPRMP28827 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC8.18□□□□□ -1.1
PTPRMP28827 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC8.18□□□□□ -1.1
PTPRMP28827 AC068790.7-201ENST00000602347 528 ntBASIC8.18□□□□□ -1.1
PTPRMP28827 AC011453.2-201ENST00000603737 729 ntBASIC8.18□□□□□ -1.1
PTPRMP28827 AL590392.1-201ENST00000604960 446 ntBASIC8.18□□□□□ -1.1
PTPRMP28827 HIRAP1-201ENST00000605318 787 ntBASIC8.18□□□□□ -1.1
PTPRMP28827 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC8.18□□□□□ -1.1
PTPRMP28827 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC8.18□□□□□ -1.1
PTPRMP28827 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PTPRMP28827 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
PTPRMP28827 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
PTPRMP28827 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PTPRMP28827 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
PTPRMP28827 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC8.17□□□□□ -1.1
PTPRMP28827 GMDS-AS1-202ENST00000505870 8217 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
PTPRMP28827 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
PTPRMP28827 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
PTPRMP28827 ZNF445-202ENST00000425708 10052 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
PTPRMP28827 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
PTPRMP28827 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
PTPRMP28827 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
PTPRMP28827 RN7SKP95-201ENST00000362860 303 ntBASIC8.17□□□□□ -1.1
PTPRMP28827 SNORA48.7-201ENST00000391302 135 ntBASIC8.17□□□□□ -1.1
PTPRMP28827 GAPDHP15-201ENST00000398586 975 ntBASIC8.17□□□□□ -1.1
PTPRMP28827 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC8.17□□□□□ -1.1
PTPRMP28827 OR2AM1P-201ENST00000422137 422 ntBASIC8.17□□□□□ -1.1
PTPRMP28827 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC8.17□□□□□ -1.1
PTPRMP28827 AC079922.1-201ENST00000443291 359 ntBASIC8.17□□□□□ -1.1
PTPRMP28827 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC8.17□□□□□ -1.1
PTPRMP28827 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC8.17□□□□□ -1.1
PTPRMP28827 MIR4675-201ENST00000577898 77 ntBASIC8.17□□□□□ -1.1
PTPRMP28827 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC8.17□□□□□ -1.1
PTPRMP28827 AC090607.5-201ENST00000615692 224 ntBASIC8.17□□□□□ -1.1
PTPRMP28827 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC8.17□□□□□ -1.1
PTPRMP28827 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
PTPRMP28827 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC8.17□□□□□ -1.1
PTPRMP28827 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
PTPRMP28827 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
PTPRMP28827 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
PTPRMP28827 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
PTPRMP28827 AC008124.1-201ENST00000609803 9730 ntBASIC8.17□□□□□ -1.1
PTPRMP28827 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
PTPRMP28827 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC8.17□□□□□ -1.1
PTPRMP28827 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
PTPRMP28827 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC8.16□□□□□ -1.1
PTPRMP28827 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
PTPRMP28827 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
PTPRMP28827 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms