Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 AC099654.8-201ENST00000637757 681 ntBASIC5.51□□□□□ -1.53
TNFRSF1BP20333 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
TNFRSF1BP20333 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TNFRSF1BP20333 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.51□□□□□ -1.53
TNFRSF1BP20333 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC5.51□□□□□ -1.53
TNFRSF1BP20333 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.51□□□□□ -1.53
TNFRSF1BP20333 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.51□□□□□ -1.53
TNFRSF1BP20333 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TNFRSF1BP20333 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.51□□□□□ -1.53
TNFRSF1BP20333 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.51□□□□□ -1.53
TNFRSF1BP20333 AC027279.4-201ENST00000624371 2072 ntBASIC5.51□□□□□ -1.53
TNFRSF1BP20333 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TNFRSF1BP20333 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
TNFRSF1BP20333 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
TNFRSF1BP20333 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC5.5□□□□□ -1.53
TNFRSF1BP20333 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
TNFRSF1BP20333 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TNFRSF1BP20333 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TNFRSF1BP20333 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TNFRSF1BP20333 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
TNFRSF1BP20333 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.5□□□□□ -1.53
TNFRSF1BP20333 OFD1P17-201ENST00000437639 3018 ntBASIC5.5□□□□□ -1.53
TNFRSF1BP20333 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
TNFRSF1BP20333 RN7SKP128-201ENST00000364270 303 ntBASIC5.5□□□□□ -1.53
TNFRSF1BP20333 SNORD51.1-201ENST00000365405 77 ntBASIC5.5□□□□□ -1.53
TNFRSF1BP20333 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.5□□□□□ -1.53
TNFRSF1BP20333 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.5□□□□□ -1.53
TNFRSF1BP20333 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
TNFRSF1BP20333 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC5.5□□□□□ -1.53
TNFRSF1BP20333 RPL7P58-201ENST00000402913 758 ntBASIC5.5□□□□□ -1.53
TNFRSF1BP20333 AMZ2P2-201ENST00000406819 1057 ntBASIC5.5□□□□□ -1.53
TNFRSF1BP20333 SNRPEP6-201ENST00000407465 277 ntBASIC5.5□□□□□ -1.53
TNFRSF1BP20333 RN7SKP108-201ENST00000411367 328 ntBASIC5.5□□□□□ -1.53
TNFRSF1BP20333 RPL35AP31-201ENST00000418340 337 ntBASIC5.5□□□□□ -1.53
TNFRSF1BP20333 VN1R20P-201ENST00000425215 966 ntBASIC5.5□□□□□ -1.53
TNFRSF1BP20333 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.5□□□□□ -1.53
TNFRSF1BP20333 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TNFRSF1BP20333 RPS12P17-201ENST00000438591 377 ntBASIC5.5□□□□□ -1.53
TNFRSF1BP20333 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC5.5□□□□□ -1.53
TNFRSF1BP20333 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC5.5□□□□□ -1.53
TNFRSF1BP20333 RSU1P1-201ENST00000453416 441 ntBASIC5.5□□□□□ -1.53
TNFRSF1BP20333 FRG2FP-204ENST00000453982 852 ntBASIC5.5□□□□□ -1.53
TNFRSF1BP20333 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
TNFRSF1BP20333 AC104164.1-201ENST00000460282 590 ntBASIC5.5□□□□□ -1.53
TNFRSF1BP20333 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.5□□□□□ -1.53
TNFRSF1BP20333 H3F3AP5-201ENST00000475267 429 ntBASIC5.5□□□□□ -1.53
TNFRSF1BP20333 RPL12P30-201ENST00000488389 499 ntBASIC5.5□□□□□ -1.53
TNFRSF1BP20333 RPL23AP73-201ENST00000492507 471 ntBASIC5.5□□□□□ -1.53
TNFRSF1BP20333 AC021146.5-201ENST00000503544 545 ntBASIC5.5□□□□□ -1.53
TNFRSF1BP20333 AC016550.3-201ENST00000515706 767 ntBASIC5.5□□□□□ -1.53
TNFRSF1BP20333 AC009879.1-201ENST00000520029 839 ntBASIC5.5□□□□□ -1.53
TNFRSF1BP20333 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TNFRSF1BP20333 AC036111.2-201ENST00000533247 901 ntBASIC5.5□□□□□ -1.53
TNFRSF1BP20333 VBP1-203ENST00000535916 944 ntTSL 2 BASIC5.5□□□□□ -1.53
TNFRSF1BP20333 AC074029.2-201ENST00000551045 634 ntBASIC5.5□□□□□ -1.53
TNFRSF1BP20333 AC126615.2-201ENST00000553003 515 ntBASIC5.5□□□□□ -1.53
TNFRSF1BP20333 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC5.5□□□□□ -1.53
TNFRSF1BP20333 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.5□□□□□ -1.53
TNFRSF1BP20333 AC007346.2-201ENST00000564816 892 ntBASIC5.5□□□□□ -1.53
TNFRSF1BP20333 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.5□□□□□ -1.53
TNFRSF1BP20333 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.5□□□□□ -1.53
TNFRSF1BP20333 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.5□□□□□ -1.53
TNFRSF1BP20333 RN7SL66P-201ENST00000582099 264 ntBASIC5.5□□□□□ -1.53
TNFRSF1BP20333 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.5□□□□□ -1.53
TNFRSF1BP20333 AC060780.2-201ENST00000589047 198 ntBASIC5.5□□□□□ -1.53
TNFRSF1BP20333 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TNFRSF1BP20333 ZNF92P2-201ENST00000600543 1059 ntBASIC5.5□□□□□ -1.53
TNFRSF1BP20333 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.5□□□□□ -1.53
TNFRSF1BP20333 AC009237.12-201ENST00000604755 742 ntBASIC5.5□□□□□ -1.53
TNFRSF1BP20333 AL645933.2-201ENST00000606743 1207 ntBASIC5.5□□□□□ -1.53
TNFRSF1BP20333 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC5.5□□□□□ -1.53
TNFRSF1BP20333 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TNFRSF1BP20333 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.5□□□□□ -1.53
TNFRSF1BP20333 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.5□□□□□ -1.53
TNFRSF1BP20333 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TNFRSF1BP20333 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.5□□□□□ -1.53
TNFRSF1BP20333 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
TNFRSF1BP20333 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TNFRSF1BP20333 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TNFRSF1BP20333 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.49□□□□□ -1.53
TNFRSF1BP20333 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TNFRSF1BP20333 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TNFRSF1BP20333 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TNFRSF1BP20333 WDR95P-201ENST00000425638 1542 ntBASIC5.49□□□□□ -1.53
TNFRSF1BP20333 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.49□□□□□ -1.53
TNFRSF1BP20333 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.49□□□□□ -1.53
TNFRSF1BP20333 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.49□□□□□ -1.53
TNFRSF1BP20333 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TNFRSF1BP20333 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TNFRSF1BP20333 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TNFRSF1BP20333 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TNFRSF1BP20333 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TNFRSF1BP20333 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.49□□□□□ -1.53
TNFRSF1BP20333 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TNFRSF1BP20333 AC025470.1-201ENST00000510053 2032 ntBASIC5.49□□□□□ -1.53
TNFRSF1BP20333 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
TNFRSF1BP20333 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.49□□□□□ -1.53
TNFRSF1BP20333 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TNFRSF1BP20333 RNA5SP211-201ENST00000365516 117 ntBASIC5.49□□□□□ -1.53
TNFRSF1BP20333 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms