Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.06■□□□□ 0.64
PCDHGA11Q9Y5H2 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
PCDHGA11Q9Y5H2 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDHGA11Q9Y5H2 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PCDHGA11Q9Y5H2 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA11Q9Y5H2 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA11Q9Y5H2 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PCDHGA11Q9Y5H2 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.06■□□□□ 0.64
PCDHGA11Q9Y5H2 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDHGA11Q9Y5H2 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PCDHGA11Q9Y5H2 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
PCDHGA11Q9Y5H2 AC097658.1-201ENST00000475555 843 ntBASIC19.06■□□□□ 0.64
PCDHGA11Q9Y5H2 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.06■□□□□ 0.64
PCDHGA11Q9Y5H2 AC005829.2-201ENST00000571422 1056 ntBASIC19.06■□□□□ 0.64
PCDHGA11Q9Y5H2 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDHGA11Q9Y5H2 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.06■□□□□ 0.64
PCDHGA11Q9Y5H2 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDHGA11Q9Y5H2 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA11Q9Y5H2 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA11Q9Y5H2 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
PCDHGA11Q9Y5H2 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
PCDHGA11Q9Y5H2 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA11Q9Y5H2 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA11Q9Y5H2 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
PCDHGA11Q9Y5H2 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PCDHGA11Q9Y5H2 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHGA11Q9Y5H2 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA11Q9Y5H2 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
PCDHGA11Q9Y5H2 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
PCDHGA11Q9Y5H2 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.05■□□□□ 0.64
PCDHGA11Q9Y5H2 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA11Q9Y5H2 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.05■□□□□ 0.64
PCDHGA11Q9Y5H2 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.05■□□□□ 0.64
PCDHGA11Q9Y5H2 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHGA11Q9Y5H2 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHGA11Q9Y5H2 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHGA11Q9Y5H2 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.05■□□□□ 0.64
PCDHGA11Q9Y5H2 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHGA11Q9Y5H2 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA11Q9Y5H2 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
PCDHGA11Q9Y5H2 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA11Q9Y5H2 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.05■□□□□ 0.64
PCDHGA11Q9Y5H2 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA11Q9Y5H2 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA11Q9Y5H2 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA11Q9Y5H2 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHGA11Q9Y5H2 AIRN-201ENST00000601203 4374 ntBASIC19.05■□□□□ 0.64
PCDHGA11Q9Y5H2 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.05■□□□□ 0.64
PCDHGA11Q9Y5H2 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
PCDHGA11Q9Y5H2 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.05■□□□□ 0.64
PCDHGA11Q9Y5H2 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA11Q9Y5H2 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
PCDHGA11Q9Y5H2 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA11Q9Y5H2 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
PCDHGA11Q9Y5H2 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA11Q9Y5H2 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA11Q9Y5H2 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA11Q9Y5H2 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA11Q9Y5H2 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA11Q9Y5H2 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHGA11Q9Y5H2 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA11Q9Y5H2 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
PCDHGA11Q9Y5H2 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PCDHGA11Q9Y5H2 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.04■□□□□ 0.64
PCDHGA11Q9Y5H2 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA11Q9Y5H2 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.04■□□□□ 0.64
PCDHGA11Q9Y5H2 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.04■□□□□ 0.64
PCDHGA11Q9Y5H2 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
PCDHGA11Q9Y5H2 AL109923.1-201ENST00000618799 583 ntBASIC19.04■□□□□ 0.64
PCDHGA11Q9Y5H2 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
PCDHGA11Q9Y5H2 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.04■□□□□ 0.64
PCDHGA11Q9Y5H2 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
PCDHGA11Q9Y5H2 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA11Q9Y5H2 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA11Q9Y5H2 AL158211.5-201ENST00000623583 2518 ntBASIC19.04■□□□□ 0.64
PCDHGA11Q9Y5H2 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
PCDHGA11Q9Y5H2 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA11Q9Y5H2 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA11Q9Y5H2 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA11Q9Y5H2 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
PCDHGA11Q9Y5H2 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA11Q9Y5H2 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDHGA11Q9Y5H2 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA11Q9Y5H2 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA11Q9Y5H2 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDHGA11Q9Y5H2 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA11Q9Y5H2 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA11Q9Y5H2 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.03■□□□□ 0.64
PCDHGA11Q9Y5H2 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDHGA11Q9Y5H2 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDHGA11Q9Y5H2 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA11Q9Y5H2 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDHGA11Q9Y5H2 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA11Q9Y5H2 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA11Q9Y5H2 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA11Q9Y5H2 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA11Q9Y5H2 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDHGA11Q9Y5H2 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
PCDHGA11Q9Y5H2 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA11Q9Y5H2 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms