Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGA9Q9Y5G4 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.4■□□□□ 0.54
PCDHGA9Q9Y5G4 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGA9Q9Y5G4 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGA9Q9Y5G4 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PCDHGA9Q9Y5G4 AC079598.2-202ENST00000546624 1451 ntBASIC18.39■□□□□ 0.54
PCDHGA9Q9Y5G4 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.54
PCDHGA9Q9Y5G4 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.39■□□□□ 0.54
PCDHGA9Q9Y5G4 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
PCDHGA9Q9Y5G4 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA9Q9Y5G4 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDHGA9Q9Y5G4 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA9Q9Y5G4 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA9Q9Y5G4 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
PCDHGA9Q9Y5G4 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDHGA9Q9Y5G4 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA9Q9Y5G4 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA9Q9Y5G4 KSR1P1-201ENST00000446298 240 ntBASIC18.39■□□□□ 0.53
PCDHGA9Q9Y5G4 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA9Q9Y5G4 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDHGA9Q9Y5G4 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA9Q9Y5G4 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDHGA9Q9Y5G4 AL049597.2-201ENST00000565575 961 ntBASIC18.39■□□□□ 0.53
PCDHGA9Q9Y5G4 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.39■□□□□ 0.53
PCDHGA9Q9Y5G4 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.39■□□□□ 0.53
PCDHGA9Q9Y5G4 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDHGA9Q9Y5G4 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA9Q9Y5G4 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.39■□□□□ 0.53
PCDHGA9Q9Y5G4 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
PCDHGA9Q9Y5G4 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
PCDHGA9Q9Y5G4 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA9Q9Y5G4 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA9Q9Y5G4 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA9Q9Y5G4 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA9Q9Y5G4 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.39■□□□□ 0.53
PCDHGA9Q9Y5G4 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
PCDHGA9Q9Y5G4 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDHGA9Q9Y5G4 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA9Q9Y5G4 GABARAPL3-202ENST00000624044 1851 ntBASIC18.38■□□□□ 0.53
PCDHGA9Q9Y5G4 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.38■□□□□ 0.53
PCDHGA9Q9Y5G4 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.38■□□□□ 0.53
PCDHGA9Q9Y5G4 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDHGA9Q9Y5G4 AC116562.2-201ENST00000507042 360 ntBASIC18.38■□□□□ 0.53
PCDHGA9Q9Y5G4 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.38■□□□□ 0.53
PCDHGA9Q9Y5G4 AP000525.1-201ENST00000608286 694 ntBASIC18.38■□□□□ 0.53
PCDHGA9Q9Y5G4 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA9Q9Y5G4 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA9Q9Y5G4 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA9Q9Y5G4 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA9Q9Y5G4 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA9Q9Y5G4 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
PCDHGA9Q9Y5G4 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA9Q9Y5G4 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.38■□□□□ 0.53
PCDHGA9Q9Y5G4 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA9Q9Y5G4 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA9Q9Y5G4 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
PCDHGA9Q9Y5G4 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA9Q9Y5G4 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA9Q9Y5G4 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.37■□□□□ 0.53
PCDHGA9Q9Y5G4 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA9Q9Y5G4 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA9Q9Y5G4 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA9Q9Y5G4 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA9Q9Y5G4 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.37■□□□□ 0.53
PCDHGA9Q9Y5G4 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA9Q9Y5G4 NIFKP9-201ENST00000419265 221 ntBASIC18.37■□□□□ 0.53
PCDHGA9Q9Y5G4 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHGA9Q9Y5G4 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA9Q9Y5G4 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA9Q9Y5G4 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA9Q9Y5G4 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA9Q9Y5G4 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHGA9Q9Y5G4 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA9Q9Y5G4 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHGA9Q9Y5G4 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
PCDHGA9Q9Y5G4 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGA9Q9Y5G4 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGA9Q9Y5G4 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGA9Q9Y5G4 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGA9Q9Y5G4 ARMC10P1-201ENST00000313754 855 ntBASIC18.36■□□□□ 0.53
PCDHGA9Q9Y5G4 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGA9Q9Y5G4 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGA9Q9Y5G4 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.36■□□□□ 0.53
PCDHGA9Q9Y5G4 MIR1238-201ENST00000408483 83 ntBASIC18.36■□□□□ 0.53
PCDHGA9Q9Y5G4 AC113347.1-201ENST00000413321 391 ntBASIC18.36■□□□□ 0.53
PCDHGA9Q9Y5G4 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGA9Q9Y5G4 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGA9Q9Y5G4 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGA9Q9Y5G4 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.36■□□□□ 0.53
PCDHGA9Q9Y5G4 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGA9Q9Y5G4 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.36■□□□□ 0.53
PCDHGA9Q9Y5G4 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGA9Q9Y5G4 FITM1-202ENST00000559294 800 ntBASIC18.36■□□□□ 0.53
PCDHGA9Q9Y5G4 NAPSB-206ENST00000562112 1266 ntBASIC18.36■□□□□ 0.53
PCDHGA9Q9Y5G4 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.36■□□□□ 0.53
PCDHGA9Q9Y5G4 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
PCDHGA9Q9Y5G4 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.36■□□□□ 0.53
PCDHGA9Q9Y5G4 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.36■□□□□ 0.53
PCDHGA9Q9Y5G4 LINC01568-207ENST00000641790 1380 ntBASIC18.36■□□□□ 0.53
PCDHGA9Q9Y5G4 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms