Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB11Q9Y5F2 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB11Q9Y5F2 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.29■□□□□ 0.68
PCDHB11Q9Y5F2 AFG3L1P-217ENST00000557444 2447 ntBASIC19.29■□□□□ 0.68
PCDHB11Q9Y5F2 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB11Q9Y5F2 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.28■□□□□ 0.68
PCDHB11Q9Y5F2 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB11Q9Y5F2 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB11Q9Y5F2 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.28■□□□□ 0.68
PCDHB11Q9Y5F2 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
PCDHB11Q9Y5F2 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDHB11Q9Y5F2 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PCDHB11Q9Y5F2 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PCDHB11Q9Y5F2 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB11Q9Y5F2 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB11Q9Y5F2 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB11Q9Y5F2 TSPY7P-201ENST00000431358 1114 ntBASIC19.28■□□□□ 0.68
PCDHB11Q9Y5F2 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB11Q9Y5F2 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.28■□□□□ 0.68
PCDHB11Q9Y5F2 PRKY-204ENST00000533551 1019 ntBASIC19.28■□□□□ 0.68
PCDHB11Q9Y5F2 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDHB11Q9Y5F2 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB11Q9Y5F2 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.28■□□□□ 0.68
PCDHB11Q9Y5F2 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
PCDHB11Q9Y5F2 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB11Q9Y5F2 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PCDHB11Q9Y5F2 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB11Q9Y5F2 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDHB11Q9Y5F2 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB11Q9Y5F2 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB11Q9Y5F2 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB11Q9Y5F2 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB11Q9Y5F2 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB11Q9Y5F2 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.27■□□□□ 0.68
PCDHB11Q9Y5F2 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB11Q9Y5F2 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB11Q9Y5F2 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDHB11Q9Y5F2 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB11Q9Y5F2 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
PCDHB11Q9Y5F2 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
PCDHB11Q9Y5F2 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB11Q9Y5F2 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.27■□□□□ 0.68
PCDHB11Q9Y5F2 AL049637.2-201ENST00000641778 930 ntBASIC19.27■□□□□ 0.68
PCDHB11Q9Y5F2 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PCDHB11Q9Y5F2 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PCDHB11Q9Y5F2 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.27■□□□□ 0.67
PCDHB11Q9Y5F2 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.27■□□□□ 0.67
PCDHB11Q9Y5F2 BX119927.1-201ENST00000636596 1552 ntBASIC19.27■□□□□ 0.67
PCDHB11Q9Y5F2 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
PCDHB11Q9Y5F2 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.67
PCDHB11Q9Y5F2 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB11Q9Y5F2 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB11Q9Y5F2 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHB11Q9Y5F2 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB11Q9Y5F2 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
PCDHB11Q9Y5F2 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB11Q9Y5F2 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHB11Q9Y5F2 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
PCDHB11Q9Y5F2 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB11Q9Y5F2 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB11Q9Y5F2 KRASP1-201ENST00000407852 552 ntBASIC19.26■□□□□ 0.67
PCDHB11Q9Y5F2 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB11Q9Y5F2 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.26■□□□□ 0.67
PCDHB11Q9Y5F2 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHB11Q9Y5F2 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHB11Q9Y5F2 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHB11Q9Y5F2 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHB11Q9Y5F2 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.26■□□□□ 0.67
PCDHB11Q9Y5F2 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.26■□□□□ 0.67
PCDHB11Q9Y5F2 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB11Q9Y5F2 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHB11Q9Y5F2 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB11Q9Y5F2 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDHB11Q9Y5F2 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB11Q9Y5F2 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB11Q9Y5F2 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHB11Q9Y5F2 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB11Q9Y5F2 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB11Q9Y5F2 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB11Q9Y5F2 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB11Q9Y5F2 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
PCDHB11Q9Y5F2 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
PCDHB11Q9Y5F2 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHB11Q9Y5F2 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.25■□□□□ 0.67
PCDHB11Q9Y5F2 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB11Q9Y5F2 KRT18P21-201ENST00000515767 1272 ntBASIC19.25■□□□□ 0.67
PCDHB11Q9Y5F2 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB11Q9Y5F2 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB11Q9Y5F2 AC010331.1-201ENST00000611423 582 ntBASIC19.25■□□□□ 0.67
PCDHB11Q9Y5F2 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDHB11Q9Y5F2 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PCDHB11Q9Y5F2 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB11Q9Y5F2 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PCDHB11Q9Y5F2 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB11Q9Y5F2 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB11Q9Y5F2 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.25■□□□□ 0.67
PCDHB11Q9Y5F2 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB11Q9Y5F2 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHB11Q9Y5F2 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB11Q9Y5F2 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms