Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RCL1Q9Y2P8 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RCL1Q9Y2P8 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RCL1Q9Y2P8 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.06■□□□□ 0.16
RCL1Q9Y2P8 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RCL1Q9Y2P8 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC16.06■□□□□ 0.16
RCL1Q9Y2P8 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RCL1Q9Y2P8 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RCL1Q9Y2P8 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC16.06■□□□□ 0.16
RCL1Q9Y2P8 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
RCL1Q9Y2P8 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RCL1Q9Y2P8 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
RCL1Q9Y2P8 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.06■□□□□ 0.16
RCL1Q9Y2P8 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RCL1Q9Y2P8 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RCL1Q9Y2P8 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RCL1Q9Y2P8 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RCL1Q9Y2P8 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
RCL1Q9Y2P8 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.06■□□□□ 0.16
RCL1Q9Y2P8 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RCL1Q9Y2P8 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RCL1Q9Y2P8 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RCL1Q9Y2P8 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
RCL1Q9Y2P8 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RCL1Q9Y2P8 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RCL1Q9Y2P8 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RCL1Q9Y2P8 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.06■□□□□ 0.16
RCL1Q9Y2P8 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RCL1Q9Y2P8 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RCL1Q9Y2P8 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RCL1Q9Y2P8 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC16.05■□□□□ 0.16
RCL1Q9Y2P8 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RCL1Q9Y2P8 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
RCL1Q9Y2P8 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC16.05■□□□□ 0.16
RCL1Q9Y2P8 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RCL1Q9Y2P8 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RCL1Q9Y2P8 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC16.05■□□□□ 0.16
RCL1Q9Y2P8 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RCL1Q9Y2P8 AC018470.1-201ENST00000624790 3129 ntBASIC16.05■□□□□ 0.16
RCL1Q9Y2P8 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RCL1Q9Y2P8 AC135279.3-201ENST00000610945 1311 ntBASIC16.05■□□□□ 0.16
RCL1Q9Y2P8 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RCL1Q9Y2P8 AC091799.1-201ENST00000422823 811 ntBASIC16.05■□□□□ 0.16
RCL1Q9Y2P8 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC16.05■□□□□ 0.16
RCL1Q9Y2P8 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RCL1Q9Y2P8 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC16.05■□□□□ 0.16
RCL1Q9Y2P8 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC16.05■□□□□ 0.16
RCL1Q9Y2P8 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RCL1Q9Y2P8 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC16.05■□□□□ 0.16
RCL1Q9Y2P8 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC16.05■□□□□ 0.16
RCL1Q9Y2P8 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RCL1Q9Y2P8 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RCL1Q9Y2P8 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.05■□□□□ 0.16
RCL1Q9Y2P8 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
RCL1Q9Y2P8 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RCL1Q9Y2P8 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.05■□□□□ 0.16
RCL1Q9Y2P8 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
RCL1Q9Y2P8 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RCL1Q9Y2P8 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RCL1Q9Y2P8 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RCL1Q9Y2P8 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RCL1Q9Y2P8 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.04■□□□□ 0.16
RCL1Q9Y2P8 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RCL1Q9Y2P8 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RCL1Q9Y2P8 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
RCL1Q9Y2P8 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RCL1Q9Y2P8 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC16.04■□□□□ 0.16
RCL1Q9Y2P8 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.04■□□□□ 0.16
RCL1Q9Y2P8 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RCL1Q9Y2P8 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
RCL1Q9Y2P8 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
RCL1Q9Y2P8 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RCL1Q9Y2P8 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
RCL1Q9Y2P8 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.04■□□□□ 0.16
RCL1Q9Y2P8 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
RCL1Q9Y2P8 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RCL1Q9Y2P8 AL136116.3-201ENST00000402907 1138 ntBASIC16.04■□□□□ 0.16
RCL1Q9Y2P8 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
RCL1Q9Y2P8 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC16.04■□□□□ 0.16
RCL1Q9Y2P8 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC16.04■□□□□ 0.16
RCL1Q9Y2P8 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RCL1Q9Y2P8 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC16.04■□□□□ 0.16
RCL1Q9Y2P8 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC16.04■□□□□ 0.16
RCL1Q9Y2P8 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.04■□□□□ 0.16
RCL1Q9Y2P8 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RCL1Q9Y2P8 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
RCL1Q9Y2P8 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RCL1Q9Y2P8 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RCL1Q9Y2P8 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC16.04■□□□□ 0.16
RCL1Q9Y2P8 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RCL1Q9Y2P8 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RCL1Q9Y2P8 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RCL1Q9Y2P8 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RCL1Q9Y2P8 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RCL1Q9Y2P8 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RCL1Q9Y2P8 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.04■□□□□ 0.16
RCL1Q9Y2P8 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RCL1Q9Y2P8 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.03■□□□□ 0.16
RCL1Q9Y2P8 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RCL1Q9Y2P8 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms