Protein–RNA interactions for Protein: Q9UKN5

PRDM4, PR domain zinc finger protein 4, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4Q9UKN5 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRDM4Q9UKN5 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PRDM4Q9UKN5 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRDM4Q9UKN5 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.28■□□□□ 0.84
PRDM4Q9UKN5 AL117332.1-201ENST00000622628 974 ntBASIC20.28■□□□□ 0.84
PRDM4Q9UKN5 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PRDM4Q9UKN5 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
PRDM4Q9UKN5 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PRDM4Q9UKN5 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRDM4Q9UKN5 C8orf49-201ENST00000525043 1968 ntBASIC20.28■□□□□ 0.84
PRDM4Q9UKN5 WIZP1-201ENST00000531444 2299 ntBASIC20.28■□□□□ 0.84
PRDM4Q9UKN5 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRDM4Q9UKN5 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRDM4Q9UKN5 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
PRDM4Q9UKN5 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRDM4Q9UKN5 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PRDM4Q9UKN5 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.27■□□□□ 0.84
PRDM4Q9UKN5 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PRDM4Q9UKN5 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PRDM4Q9UKN5 AC126763.1-201ENST00000552015 2118 ntBASIC20.27■□□□□ 0.84
PRDM4Q9UKN5 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.27■□□□□ 0.84
PRDM4Q9UKN5 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRDM4Q9UKN5 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRDM4Q9UKN5 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRDM4Q9UKN5 AC011676.5-201ENST00000624864 2660 ntBASIC20.27■□□□□ 0.84
PRDM4Q9UKN5 NKILA-202ENST00000614771 2598 ntBASIC20.27■□□□□ 0.84
PRDM4Q9UKN5 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PRDM4Q9UKN5 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRDM4Q9UKN5 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PRDM4Q9UKN5 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRDM4Q9UKN5 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRDM4Q9UKN5 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRDM4Q9UKN5 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRDM4Q9UKN5 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC20.27■□□□□ 0.84
PRDM4Q9UKN5 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRDM4Q9UKN5 TCAF2P1-201ENST00000291129 2421 ntBASIC20.27■□□□□ 0.84
PRDM4Q9UKN5 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PRDM4Q9UKN5 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRDM4Q9UKN5 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
PRDM4Q9UKN5 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRDM4Q9UKN5 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
PRDM4Q9UKN5 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PRDM4Q9UKN5 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PRDM4Q9UKN5 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.27■□□□□ 0.83
PRDM4Q9UKN5 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PRDM4Q9UKN5 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PRDM4Q9UKN5 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRDM4Q9UKN5 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRDM4Q9UKN5 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRDM4Q9UKN5 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRDM4Q9UKN5 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRDM4Q9UKN5 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRDM4Q9UKN5 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRDM4Q9UKN5 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRDM4Q9UKN5 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.26■□□□□ 0.83
PRDM4Q9UKN5 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.26■□□□□ 0.83
PRDM4Q9UKN5 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.26■□□□□ 0.83
PRDM4Q9UKN5 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC20.26■□□□□ 0.83
PRDM4Q9UKN5 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRDM4Q9UKN5 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRDM4Q9UKN5 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRDM4Q9UKN5 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.26■□□□□ 0.83
PRDM4Q9UKN5 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRDM4Q9UKN5 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRDM4Q9UKN5 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRDM4Q9UKN5 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRDM4Q9UKN5 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRDM4Q9UKN5 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PRDM4Q9UKN5 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRDM4Q9UKN5 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.25■□□□□ 0.83
PRDM4Q9UKN5 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
PRDM4Q9UKN5 AC092171.4-201ENST00000609130 632 ntBASIC20.25■□□□□ 0.83
PRDM4Q9UKN5 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC20.25■□□□□ 0.83
PRDM4Q9UKN5 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRDM4Q9UKN5 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRDM4Q9UKN5 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PRDM4Q9UKN5 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC20.25■□□□□ 0.83
PRDM4Q9UKN5 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC20.25■□□□□ 0.83
PRDM4Q9UKN5 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PRDM4Q9UKN5 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRDM4Q9UKN5 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
PRDM4Q9UKN5 AL645608.8-201ENST00000606034 2086 ntBASIC20.24■□□□□ 0.83
PRDM4Q9UKN5 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.24■□□□□ 0.83
PRDM4Q9UKN5 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.24■□□□□ 0.83
PRDM4Q9UKN5 CA15P2-201ENST00000611168 834 ntBASIC20.24■□□□□ 0.83
PRDM4Q9UKN5 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRDM4Q9UKN5 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRDM4Q9UKN5 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRDM4Q9UKN5 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
PRDM4Q9UKN5 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC20.24■□□□□ 0.83
PRDM4Q9UKN5 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRDM4Q9UKN5 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRDM4Q9UKN5 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PRDM4Q9UKN5 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
PRDM4Q9UKN5 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRDM4Q9UKN5 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC20.23■□□□□ 0.83
PRDM4Q9UKN5 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PRDM4Q9UKN5 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRDM4Q9UKN5 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
PRDM4Q9UKN5 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms