Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 AC007322.1-201ENST00000426983 750 ntBASIC20.91■□□□□ 0.94
SALL4Q9UJQ4 CYP2T1P-201ENST00000432607 1285 ntBASIC20.91■□□□□ 0.94
SALL4Q9UJQ4 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SALL4Q9UJQ4 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.91■□□□□ 0.94
SALL4Q9UJQ4 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SALL4Q9UJQ4 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.91■□□□□ 0.94
SALL4Q9UJQ4 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.91■□□□□ 0.94
SALL4Q9UJQ4 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
SALL4Q9UJQ4 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.91■□□□□ 0.94
SALL4Q9UJQ4 AL121832.2-201ENST00000610979 668 ntBASIC20.91■□□□□ 0.94
SALL4Q9UJQ4 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.91■□□□□ 0.94
SALL4Q9UJQ4 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
SALL4Q9UJQ4 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SALL4Q9UJQ4 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SALL4Q9UJQ4 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SALL4Q9UJQ4 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SALL4Q9UJQ4 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SALL4Q9UJQ4 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SALL4Q9UJQ4 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.9■□□□□ 0.94
SALL4Q9UJQ4 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
SALL4Q9UJQ4 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SALL4Q9UJQ4 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SALL4Q9UJQ4 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SALL4Q9UJQ4 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.9■□□□□ 0.94
SALL4Q9UJQ4 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SALL4Q9UJQ4 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.9■□□□□ 0.94
SALL4Q9UJQ4 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.9■□□□□ 0.94
SALL4Q9UJQ4 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
SALL4Q9UJQ4 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SALL4Q9UJQ4 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SALL4Q9UJQ4 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SALL4Q9UJQ4 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.89■□□□□ 0.94
SALL4Q9UJQ4 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SALL4Q9UJQ4 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
SALL4Q9UJQ4 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
SALL4Q9UJQ4 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SALL4Q9UJQ4 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SALL4Q9UJQ4 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SALL4Q9UJQ4 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.89■□□□□ 0.93
SALL4Q9UJQ4 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.89■□□□□ 0.93
SALL4Q9UJQ4 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.89■□□□□ 0.93
SALL4Q9UJQ4 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.89■□□□□ 0.93
SALL4Q9UJQ4 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
SALL4Q9UJQ4 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SALL4Q9UJQ4 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.89■□□□□ 0.93
SALL4Q9UJQ4 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
SALL4Q9UJQ4 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SALL4Q9UJQ4 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.89■□□□□ 0.93
SALL4Q9UJQ4 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SALL4Q9UJQ4 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SALL4Q9UJQ4 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SALL4Q9UJQ4 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SALL4Q9UJQ4 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.88■□□□□ 0.93
SALL4Q9UJQ4 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SALL4Q9UJQ4 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SALL4Q9UJQ4 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SALL4Q9UJQ4 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SALL4Q9UJQ4 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.88■□□□□ 0.93
SALL4Q9UJQ4 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SALL4Q9UJQ4 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SALL4Q9UJQ4 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.88■□□□□ 0.93
SALL4Q9UJQ4 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SALL4Q9UJQ4 KRT17P1-201ENST00000399211 1546 ntBASIC20.88■□□□□ 0.93
SALL4Q9UJQ4 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SALL4Q9UJQ4 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
SALL4Q9UJQ4 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SALL4Q9UJQ4 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SALL4Q9UJQ4 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.87■□□□□ 0.93
SALL4Q9UJQ4 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SALL4Q9UJQ4 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.87■□□□□ 0.93
SALL4Q9UJQ4 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SALL4Q9UJQ4 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SALL4Q9UJQ4 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.87■□□□□ 0.93
SALL4Q9UJQ4 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.87■□□□□ 0.93
SALL4Q9UJQ4 AC083906.2-201ENST00000511578 360 ntBASIC20.87■□□□□ 0.93
SALL4Q9UJQ4 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.87■□□□□ 0.93
SALL4Q9UJQ4 AC005181.1-201ENST00000604782 1256 ntBASIC20.87■□□□□ 0.93
SALL4Q9UJQ4 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.87■□□□□ 0.93
SALL4Q9UJQ4 AL050303.2-201ENST00000619798 666 ntBASIC20.87■□□□□ 0.93
SALL4Q9UJQ4 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
SALL4Q9UJQ4 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SALL4Q9UJQ4 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SALL4Q9UJQ4 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SALL4Q9UJQ4 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
SALL4Q9UJQ4 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SALL4Q9UJQ4 AC010980.2-201ENST00000587099 1412 ntBASIC20.87■□□□□ 0.93
SALL4Q9UJQ4 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SALL4Q9UJQ4 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SALL4Q9UJQ4 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SALL4Q9UJQ4 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.86■□□□□ 0.93
SALL4Q9UJQ4 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SALL4Q9UJQ4 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SALL4Q9UJQ4 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SALL4Q9UJQ4 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SALL4Q9UJQ4 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SALL4Q9UJQ4 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.86■□□□□ 0.93
SALL4Q9UJQ4 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.86■□□□□ 0.93
SALL4Q9UJQ4 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.86■□□□□ 0.93
SALL4Q9UJQ4 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SALL4Q9UJQ4 C2orf69P4-201ENST00000565394 541 ntBASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms