Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00474Q9P2X8 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
LINC00474Q9P2X8 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC12.8□□□□□ -0.36
LINC00474Q9P2X8 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00474Q9P2X8 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC12.8□□□□□ -0.36
LINC00474Q9P2X8 ABHD17AP6-201ENST00000458502 1044 ntBASIC12.8□□□□□ -0.36
LINC00474Q9P2X8 AC005829.2-201ENST00000571422 1056 ntBASIC12.8□□□□□ -0.36
LINC00474Q9P2X8 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC12.8□□□□□ -0.36
LINC00474Q9P2X8 MYC-209ENST00000641252 345 ntBASIC12.8□□□□□ -0.36
LINC00474Q9P2X8 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
LINC00474Q9P2X8 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00474Q9P2X8 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00474Q9P2X8 AC090340.1-201ENST00000620778 4980 ntBASIC12.8□□□□□ -0.36
LINC00474Q9P2X8 AC092368.3-202ENST00000574180 1591 ntBASIC12.8□□□□□ -0.36
LINC00474Q9P2X8 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00474Q9P2X8 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00474Q9P2X8 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC12.8□□□□□ -0.36
LINC00474Q9P2X8 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00474Q9P2X8 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00474Q9P2X8 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
LINC00474Q9P2X8 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC12.8□□□□□ -0.36
LINC00474Q9P2X8 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00474Q9P2X8 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
LINC00474Q9P2X8 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00474Q9P2X8 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00474Q9P2X8 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00474Q9P2X8 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00474Q9P2X8 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00474Q9P2X8 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00474Q9P2X8 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00474Q9P2X8 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00474Q9P2X8 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00474Q9P2X8 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
LINC00474Q9P2X8 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00474Q9P2X8 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00474Q9P2X8 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
LINC00474Q9P2X8 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00474Q9P2X8 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00474Q9P2X8 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00474Q9P2X8 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC12.79□□□□□ -0.36
LINC00474Q9P2X8 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00474Q9P2X8 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00474Q9P2X8 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00474Q9P2X8 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC12.79□□□□□ -0.36
LINC00474Q9P2X8 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00474Q9P2X8 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00474Q9P2X8 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC12.79□□□□□ -0.36
LINC00474Q9P2X8 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00474Q9P2X8 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC12.79□□□□□ -0.36
LINC00474Q9P2X8 EMC9-206ENST00000560403 872 ntTSL 2 BASIC12.79□□□□□ -0.36
LINC00474Q9P2X8 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC12.79□□□□□ -0.36
LINC00474Q9P2X8 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC12.79□□□□□ -0.36
LINC00474Q9P2X8 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC12.79□□□□□ -0.36
LINC00474Q9P2X8 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC12.79□□□□□ -0.36
LINC00474Q9P2X8 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC12.79□□□□□ -0.36
LINC00474Q9P2X8 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00474Q9P2X8 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00474Q9P2X8 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC12.79□□□□□ -0.36
LINC00474Q9P2X8 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00474Q9P2X8 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00474Q9P2X8 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00474Q9P2X8 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00474Q9P2X8 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00474Q9P2X8 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
LINC00474Q9P2X8 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00474Q9P2X8 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00474Q9P2X8 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00474Q9P2X8 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00474Q9P2X8 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC12.78□□□□□ -0.36
LINC00474Q9P2X8 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00474Q9P2X8 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00474Q9P2X8 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00474Q9P2X8 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00474Q9P2X8 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00474Q9P2X8 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00474Q9P2X8 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00474Q9P2X8 GOLGA2P11-201ENST00000562660 1621 ntBASIC12.78□□□□□ -0.36
LINC00474Q9P2X8 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00474Q9P2X8 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC12.78□□□□□ -0.36
LINC00474Q9P2X8 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
LINC00474Q9P2X8 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00474Q9P2X8 GATS-209ENST00000454084 1030 ntTSL 3 BASIC12.78□□□□□ -0.36
LINC00474Q9P2X8 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC00474Q9P2X8 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC12.78□□□□□ -0.36
LINC00474Q9P2X8 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
LINC00474Q9P2X8 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00474Q9P2X8 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00474Q9P2X8 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
LINC00474Q9P2X8 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00474Q9P2X8 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00474Q9P2X8 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00474Q9P2X8 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00474Q9P2X8 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00474Q9P2X8 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00474Q9P2X8 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
LINC00474Q9P2X8 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC00474Q9P2X8 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC00474Q9P2X8 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC00474Q9P2X8 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC12.77□□□□□ -0.36
LINC00474Q9P2X8 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms