Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CXXC1Q9P0U4 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.2■□□□□ 0.98
CXXC1Q9P0U4 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CXXC1Q9P0U4 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.2■□□□□ 0.98
CXXC1Q9P0U4 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CXXC1Q9P0U4 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CXXC1Q9P0U4 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CXXC1Q9P0U4 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.19■□□□□ 0.98
CXXC1Q9P0U4 DPP3P2-201ENST00000416030 1696 ntBASIC21.19■□□□□ 0.98
CXXC1Q9P0U4 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CXXC1Q9P0U4 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CXXC1Q9P0U4 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
CXXC1Q9P0U4 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CXXC1Q9P0U4 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CXXC1Q9P0U4 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CXXC1Q9P0U4 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CXXC1Q9P0U4 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CXXC1Q9P0U4 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CXXC1Q9P0U4 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CXXC1Q9P0U4 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CXXC1Q9P0U4 FXN-203ENST00000396366 922 ntTSL 2 BASIC21.19■□□□□ 0.98
CXXC1Q9P0U4 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC21.19■□□□□ 0.98
CXXC1Q9P0U4 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CXXC1Q9P0U4 VENTXP5-201ENST00000523979 775 ntBASIC21.19■□□□□ 0.98
CXXC1Q9P0U4 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CXXC1Q9P0U4 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CXXC1Q9P0U4 DFFB-212ENST00000625756 649 ntTSL 5 BASIC21.19■□□□□ 0.98
CXXC1Q9P0U4 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CXXC1Q9P0U4 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CXXC1Q9P0U4 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CXXC1Q9P0U4 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CXXC1Q9P0U4 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CXXC1Q9P0U4 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC21.19■□□□□ 0.98
CXXC1Q9P0U4 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CXXC1Q9P0U4 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.19■□□□□ 0.98
CXXC1Q9P0U4 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CXXC1Q9P0U4 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CXXC1Q9P0U4 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
CXXC1Q9P0U4 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CXXC1Q9P0U4 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CXXC1Q9P0U4 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CXXC1Q9P0U4 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.18■□□□□ 0.98
CXXC1Q9P0U4 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CXXC1Q9P0U4 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC21.18■□□□□ 0.98
CXXC1Q9P0U4 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC21.18■□□□□ 0.98
CXXC1Q9P0U4 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CXXC1Q9P0U4 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC21.18■□□□□ 0.98
CXXC1Q9P0U4 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC21.18■□□□□ 0.98
CXXC1Q9P0U4 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC21.18■□□□□ 0.98
CXXC1Q9P0U4 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CXXC1Q9P0U4 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CXXC1Q9P0U4 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CXXC1Q9P0U4 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CXXC1Q9P0U4 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
CXXC1Q9P0U4 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
CXXC1Q9P0U4 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CXXC1Q9P0U4 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CXXC1Q9P0U4 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CXXC1Q9P0U4 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CXXC1Q9P0U4 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CXXC1Q9P0U4 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC21.17■□□□□ 0.98
CXXC1Q9P0U4 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CXXC1Q9P0U4 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CXXC1Q9P0U4 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CXXC1Q9P0U4 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC21.17■□□□□ 0.98
CXXC1Q9P0U4 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC21.17■□□□□ 0.98
CXXC1Q9P0U4 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC21.17■□□□□ 0.98
CXXC1Q9P0U4 SNX5-210ENST00000481323 562 ntTSL 3 BASIC21.17■□□□□ 0.98
CXXC1Q9P0U4 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC21.17■□□□□ 0.98
CXXC1Q9P0U4 AL136038.3-201ENST00000561909 1096 ntBASIC21.17■□□□□ 0.98
CXXC1Q9P0U4 AL512604.3-201ENST00000569583 964 ntBASIC21.17■□□□□ 0.98
CXXC1Q9P0U4 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CXXC1Q9P0U4 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.17■□□□□ 0.98
CXXC1Q9P0U4 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CXXC1Q9P0U4 ECEL1P1-201ENST00000373592 1742 ntBASIC21.17■□□□□ 0.98
CXXC1Q9P0U4 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.17■□□□□ 0.98
CXXC1Q9P0U4 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.17■□□□□ 0.98
CXXC1Q9P0U4 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CXXC1Q9P0U4 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CXXC1Q9P0U4 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CXXC1Q9P0U4 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CXXC1Q9P0U4 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.16■□□□□ 0.98
CXXC1Q9P0U4 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CXXC1Q9P0U4 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CXXC1Q9P0U4 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CXXC1Q9P0U4 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CXXC1Q9P0U4 KRT16P6-202ENST00000425692 1426 ntBASIC21.16■□□□□ 0.98
CXXC1Q9P0U4 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CXXC1Q9P0U4 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC21.16■□□□□ 0.98
CXXC1Q9P0U4 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CXXC1Q9P0U4 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CXXC1Q9P0U4 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
CXXC1Q9P0U4 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC21.16■□□□□ 0.98
CXXC1Q9P0U4 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CXXC1Q9P0U4 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC21.16■□□□□ 0.98
CXXC1Q9P0U4 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC21.16■□□□□ 0.98
CXXC1Q9P0U4 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CXXC1Q9P0U4 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.16■□□□□ 0.98
CXXC1Q9P0U4 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CXXC1Q9P0U4 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 196.7 ms