Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
THUMPD1Q9NXG2 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
THUMPD1Q9NXG2 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
THUMPD1Q9NXG2 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
THUMPD1Q9NXG2 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
THUMPD1Q9NXG2 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
THUMPD1Q9NXG2 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
THUMPD1Q9NXG2 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
THUMPD1Q9NXG2 AL355472.2-201ENST00000422958 438 ntBASIC18.48■□□□□ 0.55
THUMPD1Q9NXG2 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
THUMPD1Q9NXG2 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
THUMPD1Q9NXG2 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
THUMPD1Q9NXG2 AL162430.1-201ENST00000480705 870 ntBASIC18.48■□□□□ 0.55
THUMPD1Q9NXG2 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.48■□□□□ 0.55
THUMPD1Q9NXG2 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
THUMPD1Q9NXG2 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
THUMPD1Q9NXG2 AC133552.2-202ENST00000575694 574 ntBASIC18.48■□□□□ 0.55
THUMPD1Q9NXG2 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
THUMPD1Q9NXG2 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.48■□□□□ 0.55
THUMPD1Q9NXG2 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.48■□□□□ 0.55
THUMPD1Q9NXG2 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
THUMPD1Q9NXG2 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
THUMPD1Q9NXG2 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
THUMPD1Q9NXG2 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
THUMPD1Q9NXG2 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
THUMPD1Q9NXG2 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
THUMPD1Q9NXG2 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
THUMPD1Q9NXG2 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
THUMPD1Q9NXG2 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.48■□□□□ 0.55
THUMPD1Q9NXG2 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
THUMPD1Q9NXG2 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
THUMPD1Q9NXG2 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
THUMPD1Q9NXG2 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
THUMPD1Q9NXG2 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.47■□□□□ 0.55
THUMPD1Q9NXG2 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.47■□□□□ 0.55
THUMPD1Q9NXG2 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
THUMPD1Q9NXG2 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
THUMPD1Q9NXG2 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.47■□□□□ 0.55
THUMPD1Q9NXG2 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.47■□□□□ 0.55
THUMPD1Q9NXG2 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.47■□□□□ 0.55
THUMPD1Q9NXG2 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.47■□□□□ 0.55
THUMPD1Q9NXG2 AC005181.1-201ENST00000604782 1256 ntBASIC18.47■□□□□ 0.55
THUMPD1Q9NXG2 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
THUMPD1Q9NXG2 Z82202.1-201ENST00000623446 1880 ntBASIC18.47■□□□□ 0.55
THUMPD1Q9NXG2 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
THUMPD1Q9NXG2 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
THUMPD1Q9NXG2 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
THUMPD1Q9NXG2 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.47■□□□□ 0.55
THUMPD1Q9NXG2 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
THUMPD1Q9NXG2 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
THUMPD1Q9NXG2 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.46■□□□□ 0.55
THUMPD1Q9NXG2 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
THUMPD1Q9NXG2 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
THUMPD1Q9NXG2 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
THUMPD1Q9NXG2 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.46■□□□□ 0.55
THUMPD1Q9NXG2 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
THUMPD1Q9NXG2 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
THUMPD1Q9NXG2 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
THUMPD1Q9NXG2 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
THUMPD1Q9NXG2 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
THUMPD1Q9NXG2 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
THUMPD1Q9NXG2 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.46■□□□□ 0.55
THUMPD1Q9NXG2 LSM12P1-201ENST00000411836 588 ntBASIC18.46■□□□□ 0.55
THUMPD1Q9NXG2 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
THUMPD1Q9NXG2 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.46■□□□□ 0.55
THUMPD1Q9NXG2 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.46■□□□□ 0.55
THUMPD1Q9NXG2 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.46■□□□□ 0.55
THUMPD1Q9NXG2 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.46■□□□□ 0.55
THUMPD1Q9NXG2 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.46■□□□□ 0.55
THUMPD1Q9NXG2 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
THUMPD1Q9NXG2 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
THUMPD1Q9NXG2 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
THUMPD1Q9NXG2 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
THUMPD1Q9NXG2 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
THUMPD1Q9NXG2 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.46■□□□□ 0.55
THUMPD1Q9NXG2 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
THUMPD1Q9NXG2 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.46■□□□□ 0.55
THUMPD1Q9NXG2 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
THUMPD1Q9NXG2 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
THUMPD1Q9NXG2 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
THUMPD1Q9NXG2 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
THUMPD1Q9NXG2 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.45■□□□□ 0.54
THUMPD1Q9NXG2 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.45■□□□□ 0.54
THUMPD1Q9NXG2 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
THUMPD1Q9NXG2 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.45■□□□□ 0.54
THUMPD1Q9NXG2 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.45■□□□□ 0.54
THUMPD1Q9NXG2 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.45■□□□□ 0.54
THUMPD1Q9NXG2 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
THUMPD1Q9NXG2 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
THUMPD1Q9NXG2 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
THUMPD1Q9NXG2 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
THUMPD1Q9NXG2 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.45■□□□□ 0.54
THUMPD1Q9NXG2 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
THUMPD1Q9NXG2 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.45■□□□□ 0.54
THUMPD1Q9NXG2 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
THUMPD1Q9NXG2 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.45■□□□□ 0.54
THUMPD1Q9NXG2 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
THUMPD1Q9NXG2 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.45■□□□□ 0.54
THUMPD1Q9NXG2 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
THUMPD1Q9NXG2 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms