Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRDM9Q9NQV7 AL023875.1-201ENST00000640777 796 ntBASIC18.6■□□□□ 0.57
PRDM9Q9NQV7 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRDM9Q9NQV7 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRDM9Q9NQV7 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PRDM9Q9NQV7 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PRDM9Q9NQV7 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRDM9Q9NQV7 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.6■□□□□ 0.57
PRDM9Q9NQV7 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PRDM9Q9NQV7 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PRDM9Q9NQV7 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRDM9Q9NQV7 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRDM9Q9NQV7 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRDM9Q9NQV7 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.59■□□□□ 0.57
PRDM9Q9NQV7 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
PRDM9Q9NQV7 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRDM9Q9NQV7 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRDM9Q9NQV7 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRDM9Q9NQV7 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.59■□□□□ 0.57
PRDM9Q9NQV7 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRDM9Q9NQV7 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRDM9Q9NQV7 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PRDM9Q9NQV7 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRDM9Q9NQV7 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PRDM9Q9NQV7 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.59■□□□□ 0.57
PRDM9Q9NQV7 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRDM9Q9NQV7 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.59■□□□□ 0.57
PRDM9Q9NQV7 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.59■□□□□ 0.57
PRDM9Q9NQV7 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.59■□□□□ 0.57
PRDM9Q9NQV7 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.59■□□□□ 0.57
PRDM9Q9NQV7 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.59■□□□□ 0.57
PRDM9Q9NQV7 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
PRDM9Q9NQV7 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.59■□□□□ 0.57
PRDM9Q9NQV7 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.59■□□□□ 0.57
PRDM9Q9NQV7 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.59■□□□□ 0.57
PRDM9Q9NQV7 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRDM9Q9NQV7 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.59■□□□□ 0.57
PRDM9Q9NQV7 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PRDM9Q9NQV7 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
PRDM9Q9NQV7 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PRDM9Q9NQV7 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRDM9Q9NQV7 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
PRDM9Q9NQV7 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
PRDM9Q9NQV7 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.59■□□□□ 0.57
PRDM9Q9NQV7 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.59■□□□□ 0.57
PRDM9Q9NQV7 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.58■□□□□ 0.57
PRDM9Q9NQV7 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
PRDM9Q9NQV7 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
PRDM9Q9NQV7 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.58■□□□□ 0.57
PRDM9Q9NQV7 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PRDM9Q9NQV7 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
PRDM9Q9NQV7 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.58■□□□□ 0.57
PRDM9Q9NQV7 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
PRDM9Q9NQV7 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PRDM9Q9NQV7 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PRDM9Q9NQV7 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
PRDM9Q9NQV7 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.58■□□□□ 0.56
PRDM9Q9NQV7 AL158047.1-201ENST00000445918 881 ntBASIC18.58■□□□□ 0.56
PRDM9Q9NQV7 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.58■□□□□ 0.56
PRDM9Q9NQV7 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.58■□□□□ 0.56
PRDM9Q9NQV7 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.58■□□□□ 0.56
PRDM9Q9NQV7 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
PRDM9Q9NQV7 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.58■□□□□ 0.56
PRDM9Q9NQV7 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.58■□□□□ 0.56
PRDM9Q9NQV7 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.58■□□□□ 0.56
PRDM9Q9NQV7 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.58■□□□□ 0.56
PRDM9Q9NQV7 AL359736.2-201ENST00000621992 437 ntBASIC18.58■□□□□ 0.56
PRDM9Q9NQV7 FAM197Y4-202ENST00000622692 608 ntBASIC18.58■□□□□ 0.56
PRDM9Q9NQV7 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PRDM9Q9NQV7 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PRDM9Q9NQV7 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PRDM9Q9NQV7 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PRDM9Q9NQV7 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PRDM9Q9NQV7 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.58■□□□□ 0.56
PRDM9Q9NQV7 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.58■□□□□ 0.56
PRDM9Q9NQV7 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PRDM9Q9NQV7 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
PRDM9Q9NQV7 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PRDM9Q9NQV7 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.58■□□□□ 0.56
PRDM9Q9NQV7 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PRDM9Q9NQV7 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.58■□□□□ 0.56
PRDM9Q9NQV7 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
PRDM9Q9NQV7 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
PRDM9Q9NQV7 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRDM9Q9NQV7 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRDM9Q9NQV7 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.57■□□□□ 0.56
PRDM9Q9NQV7 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
PRDM9Q9NQV7 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PRDM9Q9NQV7 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRDM9Q9NQV7 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PRDM9Q9NQV7 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PRDM9Q9NQV7 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PRDM9Q9NQV7 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.57■□□□□ 0.56
PRDM9Q9NQV7 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.57■□□□□ 0.56
PRDM9Q9NQV7 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
PRDM9Q9NQV7 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.57■□□□□ 0.56
PRDM9Q9NQV7 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.57■□□□□ 0.56
PRDM9Q9NQV7 AC133681.1-201ENST00000465482 601 ntBASIC18.57■□□□□ 0.56
PRDM9Q9NQV7 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
PRDM9Q9NQV7 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms