Protein–RNA interactions for Protein: Q9NP91

SLC6A20, Sodium- and chloride-dependent transporter XTRP3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20Q9NP91 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
SLC6A20Q9NP91 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SLC6A20Q9NP91 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.92■□□□□ 0.62
SLC6A20Q9NP91 AC133681.1-201ENST00000465482 601 ntBASIC18.92■□□□□ 0.62
SLC6A20Q9NP91 RPS2P4-201ENST00000476944 856 ntBASIC18.92■□□□□ 0.62
SLC6A20Q9NP91 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC6A20Q9NP91 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.92■□□□□ 0.62
SLC6A20Q9NP91 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC6A20Q9NP91 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC6A20Q9NP91 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC6A20Q9NP91 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.92■□□□□ 0.62
SLC6A20Q9NP91 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SLC6A20Q9NP91 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC6A20Q9NP91 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.92■□□□□ 0.62
SLC6A20Q9NP91 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SLC6A20Q9NP91 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC6A20Q9NP91 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.91■□□□□ 0.62
SLC6A20Q9NP91 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SLC6A20Q9NP91 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC6A20Q9NP91 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SLC6A20Q9NP91 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.91■□□□□ 0.62
SLC6A20Q9NP91 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.91■□□□□ 0.62
SLC6A20Q9NP91 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.91■□□□□ 0.62
SLC6A20Q9NP91 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.91■□□□□ 0.62
SLC6A20Q9NP91 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.91■□□□□ 0.62
SLC6A20Q9NP91 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
SLC6A20Q9NP91 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.91■□□□□ 0.62
SLC6A20Q9NP91 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.91■□□□□ 0.62
SLC6A20Q9NP91 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.91■□□□□ 0.62
SLC6A20Q9NP91 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC6A20Q9NP91 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC6A20Q9NP91 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC6A20Q9NP91 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.91■□□□□ 0.62
SLC6A20Q9NP91 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC6A20Q9NP91 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC6A20Q9NP91 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SLC6A20Q9NP91 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
SLC6A20Q9NP91 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC6A20Q9NP91 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.9■□□□□ 0.62
SLC6A20Q9NP91 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC6A20Q9NP91 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SLC6A20Q9NP91 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
SLC6A20Q9NP91 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SLC6A20Q9NP91 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SLC6A20Q9NP91 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
SLC6A20Q9NP91 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.9■□□□□ 0.62
SLC6A20Q9NP91 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.9■□□□□ 0.62
SLC6A20Q9NP91 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.9■□□□□ 0.62
SLC6A20Q9NP91 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.9■□□□□ 0.62
SLC6A20Q9NP91 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SLC6A20Q9NP91 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
SLC6A20Q9NP91 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SLC6A20Q9NP91 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC6A20Q9NP91 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.9■□□□□ 0.62
SLC6A20Q9NP91 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SLC6A20Q9NP91 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
SLC6A20Q9NP91 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.9■□□□□ 0.62
SLC6A20Q9NP91 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SLC6A20Q9NP91 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SLC6A20Q9NP91 AC008550.1-201ENST00000511500 884 ntBASIC18.9■□□□□ 0.62
SLC6A20Q9NP91 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.9■□□□□ 0.62
SLC6A20Q9NP91 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.9■□□□□ 0.62
SLC6A20Q9NP91 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.9■□□□□ 0.62
SLC6A20Q9NP91 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.9■□□□□ 0.62
SLC6A20Q9NP91 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.9■□□□□ 0.62
SLC6A20Q9NP91 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.9■□□□□ 0.62
SLC6A20Q9NP91 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.9■□□□□ 0.62
SLC6A20Q9NP91 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC6A20Q9NP91 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SLC6A20Q9NP91 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SLC6A20Q9NP91 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
SLC6A20Q9NP91 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.9■□□□□ 0.62
SLC6A20Q9NP91 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC6A20Q9NP91 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.89■□□□□ 0.62
SLC6A20Q9NP91 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SLC6A20Q9NP91 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC6A20Q9NP91 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SLC6A20Q9NP91 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SLC6A20Q9NP91 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.89■□□□□ 0.61
SLC6A20Q9NP91 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC6A20Q9NP91 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.89■□□□□ 0.61
SLC6A20Q9NP91 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.89■□□□□ 0.61
SLC6A20Q9NP91 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC6A20Q9NP91 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.89■□□□□ 0.61
SLC6A20Q9NP91 AL596275.1-201ENST00000423464 877 ntBASIC18.89■□□□□ 0.61
SLC6A20Q9NP91 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.89■□□□□ 0.61
SLC6A20Q9NP91 YBX1P10-201ENST00000444752 975 ntBASIC18.89■□□□□ 0.61
SLC6A20Q9NP91 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
SLC6A20Q9NP91 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.89■□□□□ 0.61
SLC6A20Q9NP91 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.89■□□□□ 0.61
SLC6A20Q9NP91 AC110285.5-201ENST00000611501 352 ntBASIC18.89■□□□□ 0.61
SLC6A20Q9NP91 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC6A20Q9NP91 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.89■□□□□ 0.61
SLC6A20Q9NP91 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC6A20Q9NP91 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.89■□□□□ 0.61
SLC6A20Q9NP91 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC6A20Q9NP91 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SLC6A20Q9NP91 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.89■□□□□ 0.61
SLC6A20Q9NP91 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC6A20Q9NP91 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms