Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 KSR1P1-201ENST00000446298 240 ntBASIC19.68■□□□□ 0.74
TM9SF3Q9HD45 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.68■□□□□ 0.74
TM9SF3Q9HD45 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.68■□□□□ 0.74
TM9SF3Q9HD45 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.68■□□□□ 0.74
TM9SF3Q9HD45 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.68■□□□□ 0.74
TM9SF3Q9HD45 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.68■□□□□ 0.74
TM9SF3Q9HD45 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.68■□□□□ 0.74
TM9SF3Q9HD45 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.68■□□□□ 0.74
TM9SF3Q9HD45 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
TM9SF3Q9HD45 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TM9SF3Q9HD45 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
TM9SF3Q9HD45 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TM9SF3Q9HD45 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TM9SF3Q9HD45 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TM9SF3Q9HD45 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TM9SF3Q9HD45 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.67■□□□□ 0.74
TM9SF3Q9HD45 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TM9SF3Q9HD45 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TM9SF3Q9HD45 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TM9SF3Q9HD45 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TM9SF3Q9HD45 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.67■□□□□ 0.74
TM9SF3Q9HD45 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
TM9SF3Q9HD45 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
TM9SF3Q9HD45 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.67■□□□□ 0.74
TM9SF3Q9HD45 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.67■□□□□ 0.74
TM9SF3Q9HD45 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
TM9SF3Q9HD45 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TM9SF3Q9HD45 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TM9SF3Q9HD45 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TM9SF3Q9HD45 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.67■□□□□ 0.74
TM9SF3Q9HD45 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.67■□□□□ 0.74
TM9SF3Q9HD45 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TM9SF3Q9HD45 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TM9SF3Q9HD45 KRT8P17-201ENST00000453110 1448 ntBASIC19.67■□□□□ 0.74
TM9SF3Q9HD45 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.67■□□□□ 0.74
TM9SF3Q9HD45 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TM9SF3Q9HD45 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TM9SF3Q9HD45 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TM9SF3Q9HD45 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.66■□□□□ 0.74
TM9SF3Q9HD45 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TM9SF3Q9HD45 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TM9SF3Q9HD45 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TM9SF3Q9HD45 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TM9SF3Q9HD45 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TM9SF3Q9HD45 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.66■□□□□ 0.74
TM9SF3Q9HD45 AL445228.2-201ENST00000605589 952 ntBASIC19.66■□□□□ 0.74
TM9SF3Q9HD45 AC005363.2-201ENST00000618631 242 ntBASIC19.66■□□□□ 0.74
TM9SF3Q9HD45 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
TM9SF3Q9HD45 PLK5-205ENST00000642079 1969 ntBASIC19.66■□□□□ 0.74
TM9SF3Q9HD45 KRT16P1-201ENST00000399124 1418 ntBASIC19.66■□□□□ 0.74
TM9SF3Q9HD45 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TM9SF3Q9HD45 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TM9SF3Q9HD45 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TM9SF3Q9HD45 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TM9SF3Q9HD45 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
TM9SF3Q9HD45 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TM9SF3Q9HD45 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.65■□□□□ 0.74
TM9SF3Q9HD45 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.65■□□□□ 0.74
TM9SF3Q9HD45 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TM9SF3Q9HD45 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.65■□□□□ 0.74
TM9SF3Q9HD45 AC116562.2-201ENST00000507042 360 ntBASIC19.65■□□□□ 0.74
TM9SF3Q9HD45 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.65■□□□□ 0.74
TM9SF3Q9HD45 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TM9SF3Q9HD45 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TM9SF3Q9HD45 AC092865.7-201ENST00000641832 219 ntBASIC19.65■□□□□ 0.74
TM9SF3Q9HD45 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TM9SF3Q9HD45 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TM9SF3Q9HD45 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TM9SF3Q9HD45 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TM9SF3Q9HD45 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.65■□□□□ 0.74
TM9SF3Q9HD45 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.65■□□□□ 0.74
TM9SF3Q9HD45 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
TM9SF3Q9HD45 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TM9SF3Q9HD45 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TM9SF3Q9HD45 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TM9SF3Q9HD45 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.65■□□□□ 0.74
TM9SF3Q9HD45 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.65■□□□□ 0.74
TM9SF3Q9HD45 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TM9SF3Q9HD45 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
TM9SF3Q9HD45 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
TM9SF3Q9HD45 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.74
TM9SF3Q9HD45 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.64■□□□□ 0.74
TM9SF3Q9HD45 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TM9SF3Q9HD45 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TM9SF3Q9HD45 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.64■□□□□ 0.73
TM9SF3Q9HD45 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.64■□□□□ 0.73
TM9SF3Q9HD45 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TM9SF3Q9HD45 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.64■□□□□ 0.73
TM9SF3Q9HD45 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.64■□□□□ 0.73
TM9SF3Q9HD45 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.64■□□□□ 0.73
TM9SF3Q9HD45 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
TM9SF3Q9HD45 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TM9SF3Q9HD45 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TM9SF3Q9HD45 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TM9SF3Q9HD45 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TM9SF3Q9HD45 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TM9SF3Q9HD45 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
TM9SF3Q9HD45 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.64■□□□□ 0.73
TM9SF3Q9HD45 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TM9SF3Q9HD45 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms