Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.43■□□□□ 0.7
POLR1BQ9H9Y6 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.43■□□□□ 0.7
POLR1BQ9H9Y6 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLR1BQ9H9Y6 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
POLR1BQ9H9Y6 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.43■□□□□ 0.7
POLR1BQ9H9Y6 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLR1BQ9H9Y6 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
POLR1BQ9H9Y6 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLR1BQ9H9Y6 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.43■□□□□ 0.7
POLR1BQ9H9Y6 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.43■□□□□ 0.7
POLR1BQ9H9Y6 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.43■□□□□ 0.7
POLR1BQ9H9Y6 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.43■□□□□ 0.7
POLR1BQ9H9Y6 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.43■□□□□ 0.7
POLR1BQ9H9Y6 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.43■□□□□ 0.7
POLR1BQ9H9Y6 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.43■□□□□ 0.7
POLR1BQ9H9Y6 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.43■□□□□ 0.7
POLR1BQ9H9Y6 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLR1BQ9H9Y6 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
POLR1BQ9H9Y6 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR1BQ9H9Y6 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR1BQ9H9Y6 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR1BQ9H9Y6 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.42■□□□□ 0.7
POLR1BQ9H9Y6 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR1BQ9H9Y6 AC073314.1-201ENST00000568729 2216 ntBASIC19.42■□□□□ 0.7
POLR1BQ9H9Y6 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR1BQ9H9Y6 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
POLR1BQ9H9Y6 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
POLR1BQ9H9Y6 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
POLR1BQ9H9Y6 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR1BQ9H9Y6 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.42■□□□□ 0.7
POLR1BQ9H9Y6 AL355075.4-201ENST00000554988 638 ntBASIC19.42■□□□□ 0.7
POLR1BQ9H9Y6 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.42■□□□□ 0.7
POLR1BQ9H9Y6 AC012306.2-201ENST00000609350 630 ntBASIC19.42■□□□□ 0.7
POLR1BQ9H9Y6 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
POLR1BQ9H9Y6 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
POLR1BQ9H9Y6 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.42■□□□□ 0.7
POLR1BQ9H9Y6 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR1BQ9H9Y6 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
POLR1BQ9H9Y6 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.42■□□□□ 0.7
POLR1BQ9H9Y6 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.42■□□□□ 0.7
POLR1BQ9H9Y6 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR1BQ9H9Y6 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
POLR1BQ9H9Y6 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR1BQ9H9Y6 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR1BQ9H9Y6 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
POLR1BQ9H9Y6 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR1BQ9H9Y6 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.41■□□□□ 0.7
POLR1BQ9H9Y6 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR1BQ9H9Y6 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
POLR1BQ9H9Y6 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR1BQ9H9Y6 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR1BQ9H9Y6 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
POLR1BQ9H9Y6 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.41■□□□□ 0.7
POLR1BQ9H9Y6 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.41■□□□□ 0.7
POLR1BQ9H9Y6 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.41■□□□□ 0.7
POLR1BQ9H9Y6 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.41■□□□□ 0.7
POLR1BQ9H9Y6 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR1BQ9H9Y6 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.41■□□□□ 0.7
POLR1BQ9H9Y6 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
POLR1BQ9H9Y6 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR1BQ9H9Y6 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
POLR1BQ9H9Y6 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
POLR1BQ9H9Y6 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
POLR1BQ9H9Y6 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
POLR1BQ9H9Y6 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
POLR1BQ9H9Y6 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
POLR1BQ9H9Y6 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
POLR1BQ9H9Y6 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
POLR1BQ9H9Y6 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
POLR1BQ9H9Y6 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
POLR1BQ9H9Y6 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.4■□□□□ 0.7
POLR1BQ9H9Y6 AL049796.1-201ENST00000565336 1766 ntBASIC19.4■□□□□ 0.7
POLR1BQ9H9Y6 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
POLR1BQ9H9Y6 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
POLR1BQ9H9Y6 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
POLR1BQ9H9Y6 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
POLR1BQ9H9Y6 RCN1P1-201ENST00000400413 996 ntBASIC19.4■□□□□ 0.7
POLR1BQ9H9Y6 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.4■□□□□ 0.7
POLR1BQ9H9Y6 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
POLR1BQ9H9Y6 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.4■□□□□ 0.7
POLR1BQ9H9Y6 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.4■□□□□ 0.7
POLR1BQ9H9Y6 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
POLR1BQ9H9Y6 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.4■□□□□ 0.7
POLR1BQ9H9Y6 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
POLR1BQ9H9Y6 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.4■□□□□ 0.7
POLR1BQ9H9Y6 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
POLR1BQ9H9Y6 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.4■□□□□ 0.7
POLR1BQ9H9Y6 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.4■□□□□ 0.7
POLR1BQ9H9Y6 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.4■□□□□ 0.7
POLR1BQ9H9Y6 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.4■□□□□ 0.7
POLR1BQ9H9Y6 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
POLR1BQ9H9Y6 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.39■□□□□ 0.7
POLR1BQ9H9Y6 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.39■□□□□ 0.7
POLR1BQ9H9Y6 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
POLR1BQ9H9Y6 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.39■□□□□ 0.7
POLR1BQ9H9Y6 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.39■□□□□ 0.7
POLR1BQ9H9Y6 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
POLR1BQ9H9Y6 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
POLR1BQ9H9Y6 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
POLR1BQ9H9Y6 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms