Protein–RNA interactions for Protein: Q9H094

NBPF3, Neuroblastoma breakpoint family member 3, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3Q9H094 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC23.39■■□□□ 1.33
NBPF3Q9H094 TREX2-204ENST00000370212 861 ntTSL 5 BASIC23.39■■□□□ 1.33
NBPF3Q9H094 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
NBPF3Q9H094 ISG20-202ENST00000379224 540 ntTSL 3 BASIC23.39■■□□□ 1.33
NBPF3Q9H094 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
NBPF3Q9H094 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
NBPF3Q9H094 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
NBPF3Q9H094 AC133681.1-201ENST00000465482 601 ntBASIC23.39■■□□□ 1.33
NBPF3Q9H094 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC23.39■■□□□ 1.33
NBPF3Q9H094 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC23.39■■□□□ 1.33
NBPF3Q9H094 TK2-213ENST00000563369 882 ntTSL 5 BASIC23.39■■□□□ 1.33
NBPF3Q9H094 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
NBPF3Q9H094 MED17-221ENST00000639724 2317 ntTSL 5 BASIC23.39■■□□□ 1.33
NBPF3Q9H094 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
NBPF3Q9H094 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
NBPF3Q9H094 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC23.39■■□□□ 1.33
NBPF3Q9H094 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC23.39■■□□□ 1.33
NBPF3Q9H094 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
NBPF3Q9H094 AP001271.2-201ENST00000624018 1556 ntBASIC23.39■■□□□ 1.33
NBPF3Q9H094 AFG3L1P-217ENST00000557444 2447 ntBASIC23.39■■□□□ 1.33
NBPF3Q9H094 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
NBPF3Q9H094 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC23.38■■□□□ 1.33
NBPF3Q9H094 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
NBPF3Q9H094 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
NBPF3Q9H094 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
NBPF3Q9H094 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC23.38■■□□□ 1.33
NBPF3Q9H094 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC23.38■■□□□ 1.33
NBPF3Q9H094 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
NBPF3Q9H094 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC23.38■■□□□ 1.33
NBPF3Q9H094 RPS2P55-201ENST00000397318 883 ntBASIC23.38■■□□□ 1.33
NBPF3Q9H094 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC23.38■■□□□ 1.33
NBPF3Q9H094 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC23.38■■□□□ 1.33
NBPF3Q9H094 TSPY7P-201ENST00000431358 1114 ntBASIC23.38■■□□□ 1.33
NBPF3Q9H094 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC23.38■■□□□ 1.33
NBPF3Q9H094 AC107956.1-201ENST00000494359 873 ntBASIC23.38■■□□□ 1.33
NBPF3Q9H094 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC23.38■■□□□ 1.33
NBPF3Q9H094 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC23.38■■□□□ 1.33
NBPF3Q9H094 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
NBPF3Q9H094 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC23.38■■□□□ 1.33
NBPF3Q9H094 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
NBPF3Q9H094 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
NBPF3Q9H094 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC23.38■■□□□ 1.33
NBPF3Q9H094 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
NBPF3Q9H094 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
NBPF3Q9H094 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC23.37■■□□□ 1.33
NBPF3Q9H094 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
NBPF3Q9H094 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
NBPF3Q9H094 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC23.37■■□□□ 1.33
NBPF3Q9H094 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC23.37■■□□□ 1.33
NBPF3Q9H094 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC23.37■■□□□ 1.33
NBPF3Q9H094 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
NBPF3Q9H094 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC23.37■■□□□ 1.33
NBPF3Q9H094 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC23.37■■□□□ 1.33
NBPF3Q9H094 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
NBPF3Q9H094 KRASP1-201ENST00000407852 552 ntBASIC23.37■■□□□ 1.33
NBPF3Q9H094 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC23.37■■□□□ 1.33
NBPF3Q9H094 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
NBPF3Q9H094 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC23.37■■□□□ 1.33
NBPF3Q9H094 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC23.37■■□□□ 1.33
NBPF3Q9H094 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
NBPF3Q9H094 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC23.37■■□□□ 1.33
NBPF3Q9H094 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC23.37■■□□□ 1.33
NBPF3Q9H094 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC23.37■■□□□ 1.33
NBPF3Q9H094 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
NBPF3Q9H094 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
NBPF3Q9H094 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC23.36■■□□□ 1.33
NBPF3Q9H094 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
NBPF3Q9H094 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
NBPF3Q9H094 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
NBPF3Q9H094 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC23.36■■□□□ 1.33
NBPF3Q9H094 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC23.36■■□□□ 1.33
NBPF3Q9H094 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC23.36■■□□□ 1.33
NBPF3Q9H094 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
NBPF3Q9H094 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
NBPF3Q9H094 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC23.36■■□□□ 1.33
NBPF3Q9H094 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC23.36■■□□□ 1.33
NBPF3Q9H094 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
NBPF3Q9H094 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC23.36■■□□□ 1.33
NBPF3Q9H094 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
NBPF3Q9H094 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC23.36■■□□□ 1.33
NBPF3Q9H094 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
NBPF3Q9H094 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC23.36■■□□□ 1.33
NBPF3Q9H094 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
NBPF3Q9H094 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
NBPF3Q9H094 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
NBPF3Q9H094 TMEM179-206ENST00000616017 1645 ntBASIC23.35■■□□□ 1.33
NBPF3Q9H094 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
NBPF3Q9H094 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC23.35■■□□□ 1.33
NBPF3Q9H094 AC239809.2-201ENST00000415381 517 ntBASIC23.35■■□□□ 1.33
NBPF3Q9H094 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
NBPF3Q9H094 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
NBPF3Q9H094 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC23.35■■□□□ 1.33
NBPF3Q9H094 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC23.35■■□□□ 1.33
NBPF3Q9H094 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
NBPF3Q9H094 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
NBPF3Q9H094 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC23.34■■□□□ 1.33
NBPF3Q9H094 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
NBPF3Q9H094 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
NBPF3Q9H094 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
NBPF3Q9H094 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms