Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
UBE2OQ9C0C9 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC21.71■■□□□ 1.07
UBE2OQ9C0C9 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.71■■□□□ 1.07
UBE2OQ9C0C9 FBXW4P1-201ENST00000426721 2239 ntBASIC21.7■■□□□ 1.06
UBE2OQ9C0C9 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
UBE2OQ9C0C9 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.7■■□□□ 1.06
UBE2OQ9C0C9 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
UBE2OQ9C0C9 CCR12P-201ENST00000446203 998 ntBASIC21.7■■□□□ 1.06
UBE2OQ9C0C9 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
UBE2OQ9C0C9 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC21.7■■□□□ 1.06
UBE2OQ9C0C9 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
UBE2OQ9C0C9 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC21.7■■□□□ 1.06
UBE2OQ9C0C9 AC141257.4-201ENST00000634557 245 ntBASIC21.7■■□□□ 1.06
UBE2OQ9C0C9 AC136944.6-201ENST00000634818 245 ntBASIC21.7■■□□□ 1.06
UBE2OQ9C0C9 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC21.7■■□□□ 1.06
UBE2OQ9C0C9 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
UBE2OQ9C0C9 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
UBE2OQ9C0C9 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
UBE2OQ9C0C9 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
UBE2OQ9C0C9 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
UBE2OQ9C0C9 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
UBE2OQ9C0C9 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
UBE2OQ9C0C9 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
UBE2OQ9C0C9 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
UBE2OQ9C0C9 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
UBE2OQ9C0C9 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
UBE2OQ9C0C9 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
UBE2OQ9C0C9 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.69■■□□□ 1.06
UBE2OQ9C0C9 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
UBE2OQ9C0C9 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
UBE2OQ9C0C9 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
UBE2OQ9C0C9 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
UBE2OQ9C0C9 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
UBE2OQ9C0C9 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
UBE2OQ9C0C9 AP000347.1-202ENST00000435868 847 ntBASIC21.69■■□□□ 1.06
UBE2OQ9C0C9 AL359075.1-203ENST00000462729 1002 ntBASIC21.69■■□□□ 1.06
UBE2OQ9C0C9 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC21.69■■□□□ 1.06
UBE2OQ9C0C9 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
UBE2OQ9C0C9 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC21.69■■□□□ 1.06
UBE2OQ9C0C9 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC21.69■■□□□ 1.06
UBE2OQ9C0C9 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.69■■□□□ 1.06
UBE2OQ9C0C9 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
UBE2OQ9C0C9 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
UBE2OQ9C0C9 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
UBE2OQ9C0C9 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
UBE2OQ9C0C9 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.69■■□□□ 1.06
UBE2OQ9C0C9 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
UBE2OQ9C0C9 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
UBE2OQ9C0C9 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.69■■□□□ 1.06
UBE2OQ9C0C9 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
UBE2OQ9C0C9 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
UBE2OQ9C0C9 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
UBE2OQ9C0C9 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
UBE2OQ9C0C9 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
UBE2OQ9C0C9 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.68■■□□□ 1.06
UBE2OQ9C0C9 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC21.68■■□□□ 1.06
UBE2OQ9C0C9 C1QL1P1-201ENST00000568105 661 ntBASIC21.68■■□□□ 1.06
UBE2OQ9C0C9 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC21.68■■□□□ 1.06
UBE2OQ9C0C9 AC006538.3-201ENST00000612495 578 ntBASIC21.68■■□□□ 1.06
UBE2OQ9C0C9 AC130371.2-201ENST00000619443 611 ntBASIC21.68■■□□□ 1.06
UBE2OQ9C0C9 AL031432.5-201ENST00000641059 760 ntBASIC21.68■■□□□ 1.06
UBE2OQ9C0C9 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
UBE2OQ9C0C9 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
UBE2OQ9C0C9 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.68■■□□□ 1.06
UBE2OQ9C0C9 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.68■■□□□ 1.06
UBE2OQ9C0C9 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.68■■□□□ 1.06
UBE2OQ9C0C9 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
UBE2OQ9C0C9 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
UBE2OQ9C0C9 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
UBE2OQ9C0C9 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
UBE2OQ9C0C9 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
UBE2OQ9C0C9 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
UBE2OQ9C0C9 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
UBE2OQ9C0C9 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
UBE2OQ9C0C9 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
UBE2OQ9C0C9 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC21.67■■□□□ 1.06
UBE2OQ9C0C9 DAP-202ENST00000432074 1048 ntTSL 2 BASIC21.67■■□□□ 1.06
UBE2OQ9C0C9 PVRIG2P-201ENST00000435460 978 ntBASIC21.67■■□□□ 1.06
UBE2OQ9C0C9 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
UBE2OQ9C0C9 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
UBE2OQ9C0C9 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
UBE2OQ9C0C9 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
UBE2OQ9C0C9 AC007375.3-201ENST00000600936 2314 ntBASIC21.67■■□□□ 1.06
UBE2OQ9C0C9 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
UBE2OQ9C0C9 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.67■■□□□ 1.06
UBE2OQ9C0C9 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.67■■□□□ 1.06
UBE2OQ9C0C9 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.67■■□□□ 1.06
UBE2OQ9C0C9 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
UBE2OQ9C0C9 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
UBE2OQ9C0C9 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
UBE2OQ9C0C9 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
UBE2OQ9C0C9 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
UBE2OQ9C0C9 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
UBE2OQ9C0C9 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
UBE2OQ9C0C9 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
UBE2OQ9C0C9 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
UBE2OQ9C0C9 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
UBE2OQ9C0C9 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC21.66■■□□□ 1.06
UBE2OQ9C0C9 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC21.66■■□□□ 1.06
UBE2OQ9C0C9 CD81-212ENST00000526072 1172 ntTSL 5 BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms