Protein–RNA interactions for Protein: Q9BXL8

CDCA4, Cell division cycle-associated protein 4, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4Q9BXL8 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDCA4Q9BXL8 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDCA4Q9BXL8 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
CDCA4Q9BXL8 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.63■□□□□ 0.41
CDCA4Q9BXL8 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDCA4Q9BXL8 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDCA4Q9BXL8 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.63■□□□□ 0.41
CDCA4Q9BXL8 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CDCA4Q9BXL8 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDCA4Q9BXL8 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDCA4Q9BXL8 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CDCA4Q9BXL8 CDV3P1-201ENST00000471403 739 ntBASIC17.63■□□□□ 0.41
CDCA4Q9BXL8 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.63■□□□□ 0.41
CDCA4Q9BXL8 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.63■□□□□ 0.41
CDCA4Q9BXL8 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CDCA4Q9BXL8 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CDCA4Q9BXL8 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.63■□□□□ 0.41
CDCA4Q9BXL8 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC17.63■□□□□ 0.41
CDCA4Q9BXL8 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDCA4Q9BXL8 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDCA4Q9BXL8 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDCA4Q9BXL8 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.63■□□□□ 0.41
CDCA4Q9BXL8 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDCA4Q9BXL8 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDCA4Q9BXL8 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDCA4Q9BXL8 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDCA4Q9BXL8 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.63■□□□□ 0.41
CDCA4Q9BXL8 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.63■□□□□ 0.41
CDCA4Q9BXL8 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDCA4Q9BXL8 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CDCA4Q9BXL8 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CDCA4Q9BXL8 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CDCA4Q9BXL8 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDCA4Q9BXL8 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDCA4Q9BXL8 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDCA4Q9BXL8 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDCA4Q9BXL8 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.62■□□□□ 0.41
CDCA4Q9BXL8 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDCA4Q9BXL8 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.62■□□□□ 0.41
CDCA4Q9BXL8 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.62■□□□□ 0.41
CDCA4Q9BXL8 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.62■□□□□ 0.41
CDCA4Q9BXL8 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.62■□□□□ 0.41
CDCA4Q9BXL8 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CDCA4Q9BXL8 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDCA4Q9BXL8 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.62■□□□□ 0.41
CDCA4Q9BXL8 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.62■□□□□ 0.41
CDCA4Q9BXL8 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.62■□□□□ 0.41
CDCA4Q9BXL8 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDCA4Q9BXL8 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDCA4Q9BXL8 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CDCA4Q9BXL8 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
CDCA4Q9BXL8 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDCA4Q9BXL8 AC090164.3-201ENST00000610780 2143 ntBASIC17.62■□□□□ 0.41
CDCA4Q9BXL8 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDCA4Q9BXL8 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDCA4Q9BXL8 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDCA4Q9BXL8 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDCA4Q9BXL8 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDCA4Q9BXL8 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDCA4Q9BXL8 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDCA4Q9BXL8 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.61■□□□□ 0.41
CDCA4Q9BXL8 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.61■□□□□ 0.41
CDCA4Q9BXL8 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDCA4Q9BXL8 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.61■□□□□ 0.41
CDCA4Q9BXL8 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDCA4Q9BXL8 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.61■□□□□ 0.41
CDCA4Q9BXL8 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CDCA4Q9BXL8 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDCA4Q9BXL8 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDCA4Q9BXL8 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDCA4Q9BXL8 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.61■□□□□ 0.41
CDCA4Q9BXL8 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.61■□□□□ 0.41
CDCA4Q9BXL8 RARRES2P6-201ENST00000567333 442 ntBASIC17.61■□□□□ 0.41
CDCA4Q9BXL8 AP001160.3-201ENST00000601484 763 ntBASIC17.61■□□□□ 0.41
CDCA4Q9BXL8 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.61■□□□□ 0.41
CDCA4Q9BXL8 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.61■□□□□ 0.41
CDCA4Q9BXL8 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDCA4Q9BXL8 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
CDCA4Q9BXL8 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.61■□□□□ 0.41
CDCA4Q9BXL8 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDCA4Q9BXL8 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDCA4Q9BXL8 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
CDCA4Q9BXL8 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDCA4Q9BXL8 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDCA4Q9BXL8 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDCA4Q9BXL8 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDCA4Q9BXL8 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDCA4Q9BXL8 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDCA4Q9BXL8 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CDCA4Q9BXL8 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.6■□□□□ 0.41
CDCA4Q9BXL8 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.6■□□□□ 0.41
CDCA4Q9BXL8 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDCA4Q9BXL8 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.6■□□□□ 0.41
CDCA4Q9BXL8 SLC7A5P1-201ENST00000568957 537 ntBASIC17.6■□□□□ 0.41
CDCA4Q9BXL8 MIR6821-201ENST00000617625 74 ntBASIC17.6■□□□□ 0.41
CDCA4Q9BXL8 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDCA4Q9BXL8 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CDCA4Q9BXL8 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CDCA4Q9BXL8 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.6■□□□□ 0.41
CDCA4Q9BXL8 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms