Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 AL023875.1-201ENST00000640777 796 ntBASIC19.37■□□□□ 0.69
CCM2Q9BSQ5 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.37■□□□□ 0.69
CCM2Q9BSQ5 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCM2Q9BSQ5 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCM2Q9BSQ5 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CCM2Q9BSQ5 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCM2Q9BSQ5 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.36■□□□□ 0.69
CCM2Q9BSQ5 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCM2Q9BSQ5 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CCM2Q9BSQ5 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.36■□□□□ 0.69
CCM2Q9BSQ5 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.36■□□□□ 0.69
CCM2Q9BSQ5 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.36■□□□□ 0.69
CCM2Q9BSQ5 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CCM2Q9BSQ5 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CCM2Q9BSQ5 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.36■□□□□ 0.69
CCM2Q9BSQ5 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.36■□□□□ 0.69
CCM2Q9BSQ5 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.36■□□□□ 0.69
CCM2Q9BSQ5 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.36■□□□□ 0.69
CCM2Q9BSQ5 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.36■□□□□ 0.69
CCM2Q9BSQ5 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.36■□□□□ 0.69
CCM2Q9BSQ5 C1QBPP2-201ENST00000528754 825 ntBASIC19.36■□□□□ 0.69
CCM2Q9BSQ5 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.36■□□□□ 0.69
CCM2Q9BSQ5 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.36■□□□□ 0.69
CCM2Q9BSQ5 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.36■□□□□ 0.69
CCM2Q9BSQ5 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.36■□□□□ 0.69
CCM2Q9BSQ5 AC142381.4-202ENST00000563973 229 ntBASIC19.36■□□□□ 0.69
CCM2Q9BSQ5 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.36■□□□□ 0.69
CCM2Q9BSQ5 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCM2Q9BSQ5 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CCM2Q9BSQ5 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCM2Q9BSQ5 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CCM2Q9BSQ5 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CCM2Q9BSQ5 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCM2Q9BSQ5 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.36■□□□□ 0.69
CCM2Q9BSQ5 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCM2Q9BSQ5 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.35■□□□□ 0.69
CCM2Q9BSQ5 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCM2Q9BSQ5 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCM2Q9BSQ5 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCM2Q9BSQ5 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CCM2Q9BSQ5 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCM2Q9BSQ5 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCM2Q9BSQ5 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCM2Q9BSQ5 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCM2Q9BSQ5 AC239809.2-201ENST00000415381 517 ntBASIC19.35■□□□□ 0.69
CCM2Q9BSQ5 AC133681.1-201ENST00000465482 601 ntBASIC19.35■□□□□ 0.69
CCM2Q9BSQ5 RPPH1-201ENST00000516869 333 ntBASIC19.35■□□□□ 0.69
CCM2Q9BSQ5 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.35■□□□□ 0.69
CCM2Q9BSQ5 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
CCM2Q9BSQ5 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCM2Q9BSQ5 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CCM2Q9BSQ5 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCM2Q9BSQ5 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCM2Q9BSQ5 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCM2Q9BSQ5 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCM2Q9BSQ5 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCM2Q9BSQ5 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCM2Q9BSQ5 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.34■□□□□ 0.69
CCM2Q9BSQ5 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CCM2Q9BSQ5 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCM2Q9BSQ5 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.34■□□□□ 0.69
CCM2Q9BSQ5 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.34■□□□□ 0.69
CCM2Q9BSQ5 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.34■□□□□ 0.69
CCM2Q9BSQ5 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCM2Q9BSQ5 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.34■□□□□ 0.69
CCM2Q9BSQ5 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CCM2Q9BSQ5 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.34■□□□□ 0.69
CCM2Q9BSQ5 GCSHP5-201ENST00000443090 522 ntBASIC19.34■□□□□ 0.69
CCM2Q9BSQ5 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCM2Q9BSQ5 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.34■□□□□ 0.69
CCM2Q9BSQ5 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
CCM2Q9BSQ5 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.34■□□□□ 0.69
CCM2Q9BSQ5 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCM2Q9BSQ5 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
CCM2Q9BSQ5 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCM2Q9BSQ5 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.34■□□□□ 0.69
CCM2Q9BSQ5 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.34■□□□□ 0.69
CCM2Q9BSQ5 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCM2Q9BSQ5 NBPF21P-201ENST00000425093 1451 ntBASIC19.34■□□□□ 0.69
CCM2Q9BSQ5 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CCM2Q9BSQ5 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCM2Q9BSQ5 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCM2Q9BSQ5 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCM2Q9BSQ5 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCM2Q9BSQ5 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.33■□□□□ 0.69
CCM2Q9BSQ5 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
CCM2Q9BSQ5 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCM2Q9BSQ5 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCM2Q9BSQ5 KRASP1-201ENST00000407852 552 ntBASIC19.33■□□□□ 0.68
CCM2Q9BSQ5 YBX1P10-201ENST00000444752 975 ntBASIC19.33■□□□□ 0.68
CCM2Q9BSQ5 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.33■□□□□ 0.68
CCM2Q9BSQ5 AC124016.1-201ENST00000609552 612 ntBASIC19.33■□□□□ 0.68
CCM2Q9BSQ5 AL359736.2-201ENST00000621992 437 ntBASIC19.33■□□□□ 0.68
CCM2Q9BSQ5 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
CCM2Q9BSQ5 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCM2Q9BSQ5 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCM2Q9BSQ5 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.33■□□□□ 0.68
CCM2Q9BSQ5 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCM2Q9BSQ5 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.33■□□□□ 0.68
CCM2Q9BSQ5 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms